DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4653 and zmp:0000001088

DIOPT Version :10

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:XP_688573.1 Gene:zmp:0000001088 / 560086 ZFINID:ZDB-GENE-140106-48 Length:263 Species:Danio rerio


Alignment Length:266 Identity:75/266 - (28%)
Similarity:117/266 - (43%) Gaps:45/266 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLVVIVTLGV-------VQSSRLPAEVGSQPHSISL-----RRNGVHVCGGALIREKWILTAA 64
            ||||::.|.|.:       |..:|:.......|:||..     ...|.|.|||.||.:.|:||||
Zfish     3 LLLLLLCVLLEILAVSCQDVIQARIVGGYVPAPYSIKYIVSIQSATGQHFCGGTLINKYWVLTAA 67

  Fly    65 HCVSLGGGQQSYPAKSYNVRV--GSIQRLTGGQLVPLSKIIIHTNYSSSDAVGSNDLALLELETS 127
            || ::|.......|..|:|.:  |..|......|:|      |..|..|  ..:.|:.|::|::.
Zfish    68 HC-NIGEANMRIVAGDYSVGLYEGMEQFRRPHMLIP------HPQYDRS--TNNADIMLIKLQSP 123

  Fly   128 VVLNANTN--PIDLATERPAAGSQIIFSGWGSSQVDGSLSHVLQVATRQSLSASDCQ-TELYLQQ 189
            |.||:..:  |:.......|.|.....||||.:...|.:|.:|:......:|.:.|. |:.:...
Zfish   124 VYLNSYVSLVPLPRQDAMVAVGRLCSVSGWGFTTSTGGISSILRTVKLPIVSTAVCNGTDSFNGN 188

  Fly   190 --EDLLCLSPVDEDFAG-------LCSGDAGAPASYNNQLVGIAAFFVSGCGSEQ-PDGYVDVTQ 244
              |:::|        ||       .|.||:|.|.....::.||.: :.:||...| |..|..|:|
Zfish   189 ITENMIC--------AGYSTGGKDACKGDSGGPLVCEGRVYGIVS-WGNGCADAQYPGVYTAVSQ 244

  Fly   245 HLEWIN 250
            ..:||:
Zfish   245 FRQWID 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 67/241 (28%)
zmp:0000001088XP_688573.1 Tryp_SPc 27..252 CDD:238113 67/242 (28%)

Return to query results.
Submit another query.