DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4653 and prss2

DIOPT Version :9

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001011202.1 Gene:prss2 / 496627 XenbaseID:XB-GENE-6065254 Length:243 Species:Xenopus tropicalis


Alignment Length:257 Identity:76/257 - (29%)
Similarity:119/257 - (46%) Gaps:44/257 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLVVIVTLGVVQSSRLPAEVG-------SQPHSISLRRNGVHVCGGALIREKWILTAAHCVSLGG 71
            ||::.|.||...:......:|       |.|:.:|| .:|.|.|||:||..:|:::||||     
 Frog     3 LLLICVLLGAAAAFDDDKIIGGSTCARNSVPYIVSL-NSGYHFCGGSLISNQWVVSAAHC----- 61

  Fly    72 GQQSYPAKSYNVRVGSIQ-RLTGG--QLVPLSKIIIHTNYSSSDAVGSNDLALLELETSVVLNAN 133
                |.| |..||:|... .|:.|  |.:..:|:|.|.:|:|...  .||:.|::|.:...||:.
 Frog    62 ----YKA-SVQVRLGEHNIALSEGTEQFINSAKVIRHPSYNSRTI--DNDIMLIKLASPASLNSA 119

  Fly   134 TNPIDLATERPAAGSQIIFSGWGS-SQVDGSLSHVLQVATRQSLSASDCQTELYLQQ--EDLLCL 195
            .|.:.|.:...|||:..:.||||: |....:...:||......|:.:.| :..|..|  .::.| 
 Frog   120 VNTVALPSSCAAAGTSCLVSGWGNLSTTTSNYPDLLQCLNAPILTTAQC-SGAYPGQITNNMFC- 182

  Fly   196 SPVDEDFAGL-------CSGDAGAPASYNNQLVGIAAFFVSGCGSEQ-PDGYVDVTQHLEWI 249
                   ||.       |.||:|.|...|.:|.|:.::.: ||.... |..|..|..:..||
 Frog   183 -------AGFLEGGKDSCQGDSGGPVVCNGELQGVVSWGI-GCAQRNYPGVYAKVCNYNSWI 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 71/241 (29%)
Tryp_SPc 30..249 CDD:214473 69/239 (29%)
prss2NP_001011202.1 Tryp_SPc 21..239 CDD:238113 71/239 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.