DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4653 and proca

DIOPT Version :10

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_956650.2 Gene:proca / 393327 ZFINID:ZDB-GENE-060824-5 Length:434 Species:Danio rerio


Alignment Length:247 Identity:68/247 - (27%)
Similarity:111/247 - (44%) Gaps:30/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VVQSSRLPAEVGSQPHS----ISLRRNGVHVCGGALIREKWILTAAHCVSLGGGQQSYPAKSYNV 83
            |:|...:...||.:..|    :.|...|...|||.||.|.|:||||||:.        .:..::|
Zfish   190 VLQPWVMGGNVGKRGESPWQALILNHLGRFHCGGVLIDENWVLTAAHCLE--------TSSKFSV 246

  Fly    84 RVGSIQ--RLTGGQL-VPLSKIIIHTNYSSSDAVGSNDLALLELE-----TSVVLNANTNPIDLA 140
            |:|..|  |..|.:: :|:.:.|.|..|:....  .||:|||.||     ::.:|.|....::||
Zfish   247 RLGDYQRFRFEGSEVTLPVKQHISHPQYNPITV--DNDIALLRLEGPVKFSTYILPACLPSLELA 309

  Fly   141 TER-PAAGSQIIFSGWG-SSQVDGSLSHVLQVATRQSLSASDCQTELYLQQEDLLCLSPVDEDFA 203
            ... ...|:..:.:||| ::|...|.:..|.......:...:|...:.....|.:..:.|.....
Zfish   310 KRMLHRNGTVTVITGWGKNNQSATSYNSTLHYVELPIVDNKECSRHMMNNLSDNMLCAGVLGQVK 374

  Fly   204 GLCSGDAGAP--ASYNNQ--LVGIAAFFVSGCGSEQPDG-YVDVTQHLEWIN 250
            ..|.||:|.|  ..:::.  |||:.: :..|||.....| |..|..:|:||:
Zfish   375 DACEGDSGGPMMTLFHDTWFLVGLVS-WGEGCGQRDKLGIYTKVASYLDWID 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 66/240 (28%)
procaNP_956650.2 None

Return to query results.
Submit another query.