DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4653 and Tmprss9

DIOPT Version :10

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001382445.1 Gene:Tmprss9 / 314636 RGDID:1309581 Length:1095 Species:Rattus norvegicus


Alignment Length:230 Identity:72/230 - (31%)
Similarity:105/230 - (45%) Gaps:15/230 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AEVGSQPHSISL-RRNGVHVCGGALIREKWILTAAHCVSLGGGQQSYPAKSYNVRVGSIQRLTGG 94
            |.:|..|..:|| .|...|.||..|:.|:|:|:||||..:.|....:.|......:.|    |.|
  Rat   870 ASLGEWPWQVSLWLRRREHRCGAVLVAERWLLSAAHCFDVYGDPMQWAAFLGTPFLSS----TEG 930

  Fly    95 QLVPLSKIIIHTNYSSSDAVGSNDLALLELETSVVLNANTNPIDL-ATERPAAGSQIIFSGWGSS 158
            ||..:::|..|..|:....  ..|:|||||...|..:....||.| ...||..|::.:.:||||.
  Rat   931 QLERVARIYRHPFYNIYTL--DYDVALLELAGPVRRSRLVRPICLPGPTRPPEGARCVITGWGSL 993

  Fly   159 QVDGSLSHVLQVATRQSLSASDCQTELYLQQEDLLCLSPVDEDFAGLCSGDAGAPASYNNQ---- 219
            :..||::..||.|..:.||...|:....:|....:..:...:.....||||||.|.:....    
  Rat   994 REGGSMARQLQKAAVRVLSEQTCRRFYPVQISSRMLCAGFPQGGVDSCSGDAGGPLACREPSGQW 1058

  Fly   220 -LVGIAAFFVSGCGSEQ-PDGYVDVTQHLEWINEN 252
             |.|:.::.. |||... |..|..|...|.||.:|
  Rat  1059 VLTGVTSWGY-GCGRPHFPGVYTRVAAVLGWIGQN 1092

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 71/228 (31%)
Tmprss9NP_001382445.1 SEA 68..148 CDD:460188
LDLa 190..225 CDD:238060
Tryp_SPc 238..467 CDD:214473
PHA03247 <463..539 CDD:223021
Tryp_SPc 540..767 CDD:238113
Tryp_SPc 864..1089 CDD:238113 69/225 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.