DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9673 and Send1

DIOPT Version :9

Sequence 1:NP_001285346.1 Gene:CG9673 / 32649 FlyBaseID:FBgn0030775 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:253 Identity:77/253 - (30%)
Similarity:117/253 - (46%) Gaps:36/253 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LIFGLILSAEASPQGRILGGEDVAQGEYPWSASVRYNKAHVCSGAIISTNHILTAAHCVSSVGIT 77
            |:...::.....|..||:||..:...:.||..|::|...|.|.|:|.|...|:|||||:..    
  Fly    14 LLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKE---- 74

  Fly    78 PVDASTLAVRLGTINQYAGGSIVNVKSVIIHPSYG--NFLHDIAILELDETLVFSDRIQDIALPP 140
                ...::|.|:....:||.:|.|::.||||.:.  |..:|:|:|:|...|.|||.||.|.|..
  Fly    75 ----GERSIRAGSSLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPLAE 135

  Fly   141 TTDEETEDVDAELPNGTPVYVAGWGELSDGTASYK-QQKANYNTLSRSL--CEWEAGYG-YESVV 201
            |          :.|..:.....|||.   |....: :|......|.|.|  |:.:.|.| :...:
  Fly   136 T----------DPPTSSSALATGWGR---GNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDI 187

  Fly   202 CLSRAEGEGICRGDAGAAVIDDDKVLRGLTS--FNFGPCGSK-YPDVATRVSYYLTWI 256
            |..|. |:|.|.||:|..::.:.::: |:||  .|....||. |..||.    |..||
  Fly   188 CAGRM-GKGGCYGDSGGPLVFNGQLV-GITSRTGNIVCLGSSLYASVAR----YRNWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9673NP_001285346.1 Tryp_SPc 28..256 CDD:214473 73/236 (31%)
Tryp_SPc 29..259 CDD:238113 74/237 (31%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 73/236 (31%)
Tryp_SPc 30..239 CDD:238113 72/235 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.