DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and Tmprss11d

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:276 Identity:64/276 - (23%)
Similarity:120/276 - (43%) Gaps:67/276 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QPRLVILGLIGLTAVGMCHAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHC 67
            :|.|:.|            ::.||:||..|:.....:..||:::|.|.|||:::|...:||.|||
  Rat   175 RPDLITL------------SEERIIGGTQAETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHC 227

  Fly    68 VHRDGK------LIDASRLACRVGSTNQYAGGKIVNVESVAVHPDYYNL--NNNLAVITLSSELT 124
            ......      ....|.::.|:.          |.|.::..|.:|.::  :|::||:.|...:|
  Rat   228 FRSYSNPQQWTATFGVSTISPRLR----------VRVRAILAHAEYNSITRDNDIAVVQLDRPVT 282

  Fly   125 YTDRITAIPLVASGEALPAEGSEVI------VAGWGRTSDGTNSY-KIRQISLKVAPEATCLDAY 182
            :|..|..:       .|||....:|      |.|||..:.|.|:. .::|..:::.....|    
  Rat   283 FTRNIHRV-------CLPAATQNIIPDSVAYVTGWGSLTYGGNTVTNLQQGEVRIVSSEVC---- 336

  Fly   183 SDHDEQSF-------CLAHELKEG---TCHGDGGGGAIYGNT-----LIGLTNFVVGACG-SRYP 231
              ::...:       .|...::.|   .|.||.||..:..:|     ::|:.::.. .|| ...|
  Rat   337 --NEPAGYGGSVLPGMLCAGVRSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGY-QCGLPNKP 398

  Fly   232 DVFVRLSSYADWIQEQ 247
            .|:.|:::|.:||::|
  Rat   399 GVYTRVTAYRNWIRQQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 55/235 (23%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 59/251 (24%)
Blue background indicates that the domain is not in the aligned region.

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