DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and LOC560023

DIOPT Version :9

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_021325702.1 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:285 Identity:70/285 - (24%)
Similarity:115/285 - (40%) Gaps:63/285 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMQPRLVILG-----LIGLTAVGMCHA---------------QGRIMGGEDADATATTFTASLRV 45
            ||:  .|::|     ::..:|.||...               ..||:||::....:..:..||:|
Zfish     1 MME--AVLIGPFRATILSRSAAGMAQLLWVFLVLAVMVRDAFSQRIIGGQEVVPYSIKYQVSLQV 63

  Fly    46 DNAHVCGGSILSQTKILTTAHCVHRDGKLIDA----SRLACRVGSTNQYAGGKIVNVESVAVHPD 106
            |..|.|||:::....:||.||| .|...:|..    ..||...|........|:.:  .||.:|.
Zfish    64 DRKHFCGGTLIQPQWVLTAAHC-WRPASVIQVVLSEHNLAVEEGFEQVCTVAKVFS--HVAYNPK 125

  Fly   107 YYNLNNNLAVITLSSELTYTDRITA------IPLVASGEALPAEGSEVIVAGWGRTSDGTNSYKI 165
            .:  ||::.:|    :||...:|.|      :|...:.|.  |.||...|:|||.|         
Zfish   126 TF--NNDIMII----KLTAPAQINAYVQPALLPTADTPEL--AGGSSCTVSGWGVT--------- 173

  Fly   166 RQISLKVAPEATCLDA----------YSDHDEQSFCLAHEL-KEGTCHGDGGGGAIYGNTLIGLT 219
            |..:..::|....:|.          |...::...|..... .:.:|.||.||..|....|.|:.
Zfish   174 RLYNFYLSPILRAVDVEIFSSCQLYYYYRVNDNMICAGSRFGGKDSCQGDSGGPLICDGYLEGIV 238

  Fly   220 NFVVGACGSRYPDVFVRLSSYADWI 244
            ::.:|.....||.|:.::.:|..||
Zfish   239 SWGIGCALPYYPGVYTKVRNYNRWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 59/224 (26%)
Tryp_SPc 42..244 CDD:214473 57/222 (26%)
LOC560023XP_021325702.1 Tryp_SPc 43..263 CDD:214473 61/239 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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