DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and Send1

DIOPT Version :9

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:230 Identity:74/230 - (32%)
Similarity:115/230 - (50%) Gaps:21/230 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRDGKLIDASRLACRVGSTNQ 89
            ||:||...|.|...:..||:....|.|||||.|:|.|:|.|||:....:.|       |.||:..
  Fly    29 RIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCIKEGERSI-------RAGSSLH 86

  Fly    90 YAGGKIVNVESVAVHP--DYYNLNNNLAVITLSSELTYTDRITAIPLVASGEALPAEGSEVIVAG 152
            .:||.:|.||:..:||  |.:|:.|::||:.|||.|:::|.|..|||   .|..|...|..:..|
  Fly    87 DSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDSIQTIPL---AETDPPTSSSALATG 148

  Fly   153 WGRTSDGTNSYKIRQISLKVAPEATCLDAYSDHDEQSFCLAHELKEGTCHGDGGGGAIYGNTLIG 217
            |||.:......:::.:.:.:.|...|...|.:........|..:.:|.|:||.||..::...|:|
  Fly   149 WGRGNFLIRPRQLQGVEILIRPLIVCKLKYGNGVFNEDICAGRMGKGGCYGDSGGPLVFNGQLVG 213

  Fly   218 LT----NFVVGACGSRYPDVFVRLSSYADWIQEQI 248
            :|    |.|  ..||   .::..::.|.:||...|
  Fly   214 ITSRTGNIV--CLGS---SLYASVARYRNWILSAI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 67/210 (32%)
Tryp_SPc 42..244 CDD:214473 65/207 (31%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 71/224 (32%)
Tryp_SPc 30..239 CDD:238113 70/223 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24276
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.