DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and psh

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:256 Identity:68/256 - (26%)
Similarity:110/256 - (42%) Gaps:50/256 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IMGGEDADATA---------TTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRDGKLIDASRLA 81
            |:||...|...         .||....|      ||||:::...:||.||||:.|..    :...
  Fly   144 IVGGYPVDPGVYPHMAAIGYITFGTDFR------CGGSLIASRFVLTAAHCVNTDAN----TPAF 198

  Fly    82 CRVGSTN----QYAGGKIVNVESVAVHPDYY-NLNNNLAVITLSSELTYTDRITAIPLVASGEAL 141
            .|:|:.|    .::...|| :.||.:||.|. |..|::|::.|..::..||.|.  |.....:|.
  Fly   199 VRLGAVNIENPDHSYQDIV-IRSVKIHPQYVGNKYNDIAILELERDVVETDNIR--PACLHTDAT 260

  Fly   142 -PAEGSEVIVAGWG--RTSDGTNSYKIRQISLKVAPEATCLDAYSDH------------DEQSFC 191
             |...|:..|||||  ..:....|..:.:..|::.|...|..:|::.            |.....
  Fly   261 DPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCA 325

  Fly   192 LAHELKEGTCHGDGGGGAIYG-------NTLIGLTNFVVGACGSRYPDVFVRLSSYADWIQ 245
            :..:|....|.||.||..|:.       .|::|:.:...| |.:..|.::.|:|||.|:|:
  Fly   326 IDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISSGFG-CATVTPGLYTRVSSYLDFIE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 62/231 (27%)
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 68/256 (27%)
Blue background indicates that the domain is not in the aligned region.

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