DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and CG9673

DIOPT Version :9

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001285346.1 Gene:CG9673 / 32649 FlyBaseID:FBgn0030775 Length:261 Species:Drosophila melanogaster


Alignment Length:258 Identity:110/258 - (42%)
Similarity:146/258 - (56%) Gaps:14/258 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMQPRLVI-LGLI--GLTAVGMCHAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKIL 62
            |..||:.: |||:  ||........||||:||||.......::||:|.:.||||.|:|:|...||
  Fly     1 MADPRITLGLGLLIFGLILSAEASPQGRILGGEDVAQGEYPWSASVRYNKAHVCSGAIISTNHIL 65

  Fly    63 TTAHCVHRDG-KLIDASRLACRVGSTNQYAGGKIVNVESVAVHPDYYNLNNNLAVITLSSELTYT 126
            |.||||...| ..:|||.||.|:|:.||||||.||||:||.:||.|.|..:::|::.|...|.::
  Fly    66 TAAHCVSSVGITPVDASTLAVRLGTINQYAGGSIVNVKSVIIHPSYGNFLHDIAILELDETLVFS 130

  Fly   127 DRI--TAIPLVASGEA------LPAEGSEVIVAGWGRTSDGTNSYKIRQISLKVAPEATCLDAYS 183
            |||  .|:|.....|.      || .|:.|.|||||..||||.|||.::.:......:.|.....
  Fly   131 DRIQDIALPPTTDEETEDVDAELP-NGTPVYVAGWGELSDGTASYKQQKANYNTLSRSLCEWEAG 194

  Fly   184 DHDEQSFCLAHELKEGTCHGDGGGGAIYGNTLI-GLTNFVVGACGSRYPDVFVRLSSYADWIQ 245
            ...|...||:....||.|.||.|...|..:.:: |||:|..|.|||:||||..|:|.|..||:
  Fly   195 YGYESVVCLSRAEGEGICRGDAGAAVIDDDKVLRGLTSFNFGPCGSKYPDVATRVSYYLTWIE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 93/214 (43%)
Tryp_SPc 42..244 CDD:214473 91/211 (43%)
CG9673NP_001285346.1 Tryp_SPc 28..256 CDD:214473 98/228 (43%)
Tryp_SPc 29..259 CDD:238113 99/230 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 1 1.000 - - FOG0004525
OrthoInspector 1 1.000 - - otm47449
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.