DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and Tmprss3

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:261 Identity:79/261 - (30%)
Similarity:113/261 - (43%) Gaps:48/261 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 CHAQG-------RIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRDGKLIDA 77
            |.|.|       ||:||..:..|...:..||:....|:||||:::...|:|.||||:   .|...
  Rat   204 CSACGMRTGYSPRIVGGNVSSLTQWPWQVSLQFQGYHLCGGSVITPLWIVTAAHCVY---DLYHP 265

  Fly    78 SRLACRVGSTNQYAGGKIVN----------VESVAVHPDY--YNLNNNLAVITLSSELTYTDRIT 130
            .....:||         :|:          ||.:..|..|  ..|.|::|::.||..||:.:.|.
  Rat   266 KSWTVQVG---------LVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQ 321

  Fly   131 AIPLVASGEALPAEGSEVIVAGWGRTSDGT-------NSYKIRQISLKVAPEATCLDAYSDHDEQ 188
            .|.|..|.|..| :|.....:|||.|.||.       |...:..||.|:....   |.|......
  Rat   322 PICLPNSEENFP-DGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHR---DVYGGIISP 382

  Fly   189 SFCLAHELKEG--TCHGDGGGGAIYGN----TLIGLTNFVVGACGSRYPDVFVRLSSYADWIQEQ 247
            |...|..||.|  :|.||.||..:...    .|:|.|:|.:|......|.|:.|::|:.|||.||
  Rat   383 SMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQ 447

  Fly   248 I 248
            :
  Rat   448 L 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 69/229 (30%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747 3/6 (50%)
Tryp_SPc 216..444 CDD:214473 72/243 (30%)
Blue background indicates that the domain is not in the aligned region.

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