DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and Tpsg1

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:266 Identity:71/266 - (26%)
Similarity:119/266 - (44%) Gaps:28/266 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVILGLIGLTAVGM---C------HAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKI 61
            |::|.:.|::...:   |      ||..||:||..|.|.|..:.||||:...||||||:||...:
  Rat    10 LLLLAVPGISCEALQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASLRLQKVHVCGGSLLSPEWV 74

  Fly    62 LTTAHCVHRDGKLIDASRLACRVGSTNQYAGGKIVNVESVAVH---PDYYNLNNNLAVITLSSEL 123
            ||.|||....   :::|.....:|............|:.:.::   |.....:.::|::.|::.:
  Rat    75 LTAAHCFSGS---VNSSDYEVHLGELTITLSPHFSTVKQIIMYSSAPGPPGSSGDIALVQLATPV 136

  Fly   124 TYTDRITAIPL-VASGEALPAEGSEVIVAGWGRTSDG---TNSYKIRQISLKVAPEATCLDAYSD 184
            ..:.::..:.| .||.:..|  |.:..|.|||.|.:|   ...|.:::..:.|....||..|||.
  Rat   137 ALSSQVQPVCLPEASADFHP--GMQCWVTGWGYTQEGEPLKPPYNLQEAKVSVVDVETCSQAYSS 199

  Fly   185 HDE---QSFCLAHELKEGTCHGDGGGGAIYGNTLI----GLTNFVVGACGSRYPDVFVRLSSYAD 242
            .:.   ||..|........|..|.||..:.....|    |:.::..|......|.|:.|:::|.:
  Rat   200 SNGSLIQSDMLCAWGPGDACQDDSGGPLVCRVAGIWQQAGVVSWGEGCGRPDRPGVYARVTAYVN 264

  Fly   243 WIQEQI 248
            ||...|
  Rat   265 WIHRHI 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 56/218 (26%)
Tpsg1NP_001426649.1 None

Return to query results.
Submit another query.