DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and Klk1c3

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001258244.1 Gene:Klk1c3 / 292872 RGDID:735032 Length:255 Species:Rattus norvegicus


Alignment Length:255 Identity:64/255 - (25%)
Similarity:108/255 - (42%) Gaps:34/255 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LGLIGLTAVGMCHAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRDGK 73
            ||.|.....|    |.|::||...:..:..:  .:.|.|..:|||.::..:.::|.|||...:..
  Rat    12 LGQIDAAPPG----QSRVVGGFKCEKNSQPW--QVAVINEDLCGGVLIDPSWVITAAHCYSDNYH 70

  Fly    74 LIDASRLACRVGSTNQYAGGKIVNVESVAVHPDY------------YNLNNNLAVITLSSELTYT 126
            ::        :|..|.....:...|.....||||            .:.:|:|.::.||.....|
  Rat    71 VL--------LGQNNLSEDVQHRLVSQSFRHPDYKPFLMRNHTRKPKDYSNDLMLLHLSEPADIT 127

  Fly   127 DRITAIPLVASGEALPAEGSEVIVAGWGRTSDGTNSY--KIRQISLKVAPEATCLDAYSDHDEQS 189
            |.:..|.|....   |..||..:|:|||.|:.....:  .::.:::.:.....|:.||.:.....
  Rat   128 DGVKVIDLPTKE---PKVGSTCLVSGWGSTNPSEWEFPDDLQCVNIHLLSNEKCIKAYKEKVTDL 189

  Fly   190 FCLAHELKEG--TCHGDGGGGAIYGNTLIGLTNFVVGACGS-RYPDVFVRLSSYADWIQE 246
            ...|.||:.|  ||.||.||..|....|.|:|::....||. ..|.::.:|..:..||:|
  Rat   190 MLCAGELEGGKDTCRGDSGGPLICDGVLQGITSWGSVPCGEPNKPGIYTKLIKFTSWIKE 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 56/222 (25%)
Klk1c3NP_001258244.1 Tryp_SPc 24..247 CDD:214473 56/235 (24%)

Return to query results.
Submit another query.