DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and Hpn

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:248 Identity:73/248 - (29%)
Similarity:119/248 - (47%) Gaps:29/248 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRDGKLIDASRL-ACRVGSTN 88
            ||:||:|:......:..|||.|..|:||||:||...:||.|||.....:::...|: |..|..|:
  Rat   203 RIVGGQDSSLGRWPWQVSLRYDGTHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVARTS 267

  Fly    89 QYAGGKIVNVESVAVHPDYYNL--------NNNLAVITLSSELTYTDRITAIPLVASGEALPAEG 145
            .:|  ..:.|::|..|..|...        :|::|::.|||.|..|:.|..:.|.|:|:|| .:|
  Rat   268 PHA--VQLGVQAVIYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVCLPAAGQAL-VDG 329

  Fly   146 SEVIVAGWGRTS-DGTNSYKIRQISLKVAPEATC--LDAYSDH-DEQSFCLAHELKEG---TCHG 203
            ....|.|||.|. .|..:..:::..:.:.....|  .|.|.:. ..:.||..:  .||   .|.|
  Rat   330 KVCTVTGWGNTQFYGQQAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGY--PEGGIDACQG 392

  Fly   204 DGGG-----GAIYGNT---LIGLTNFVVGACGSRYPDVFVRLSSYADWIQEQI 248
            |.||     ..|.|.:   |.|:.::..|...:|.|.|:.::..:.:||.:.|
  Rat   393 DSGGPFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAI 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 67/228 (29%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736
Tryp_SPc 204..441 CDD:238113 69/241 (29%)
Blue background indicates that the domain is not in the aligned region.

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