DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and LOC286960

DIOPT Version :9

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:LOC286960 / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:253 Identity:63/253 - (24%)
Similarity:112/253 - (44%) Gaps:22/253 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VILGLIGLTAVGMCHAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRD 71
            :....:|.......:...:|:||.........:..||....:|.||||::|...:|:.|||..| 
  Rat     5 IFFAFLGAAVALPVNDDDKIVGGYTCPKHLVPYQVSLHDGISHQCGGSLISDQWVLSAAHCYKR- 68

  Fly    72 GKLIDASRLACRVGSTNQY---AGGKIVNVESVAVHPDYY--NLNNNLAVITLSSELTYTDRITA 131
                   :|..|:|..|.:   .|.:.::.|.:..||:|.  .|:|::.:|.|.|......:::.
  Rat    69 -------KLQVRLGEHNIHVLEGGEQFIDAEKIIRHPEYNKDTLDNDIMLIKLKSPAVLNSQVST 126

  Fly   132 IPLVASGEALPAEGSEVIVAGWGRTSDGTNSYK--IRQISLKVAPEATCLDAYSDH-DEQSFCLA 193
            :.|..|..:..|   :.:|:|||.|......|.  ::.:...|...::|..:|... ....|||.
  Rat   127 VSLPRSCASTDA---QCLVSGWGNTVSIGGKYPALLQCLEAPVLSASSCKKSYPGQITSNMFCLG 188

  Fly   194 H-ELKEGTCHGDGGGGAIYGNTLIGLTNFVVGACGSR-YPDVFVRLSSYADWIQEQIA 249
            . |..:.:|.||.||..:....:.|:.:: ...|..| .|.|:.::.:|..||||.:|
  Rat   189 FLEGGKDSCDGDSGGPVVCNGEIQGIVSW-GSVCAMRGKPGVYTKVCNYLSWIQETMA 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 57/214 (27%)
Tryp_SPc 42..244 CDD:214473 54/211 (26%)
LOC286960NP_775423.1 Tryp_SPc 23..240 CDD:214473 57/228 (25%)
Tryp_SPc 24..243 CDD:238113 60/230 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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