DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and LOC100490788

DIOPT Version :9

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_001333500.1 Gene:LOC100490788 / 100490788 -ID:- Length:249 Species:Xenopus tropicalis


Alignment Length:258 Identity:61/258 - (23%)
Similarity:116/258 - (44%) Gaps:29/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MQPRLVILGLIGLTAVGMCHAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAH 66
            |.| |.:|..:.:.|........:|:||.:....:..:......:..:.||||::|...|::.||
 Frog     1 MMP-LWVLMFLAVAAAAPLDDDDKIVGGYECTPHSQPWQVFFTFNGRNWCGGSLISPRWIISAAH 64

  Fly    67 CVHRDGK----LIDASRLACRVGSTNQYAGGKIVNVESVAVHPDYYN--LNNNLAVITLSSELTY 125
            | ::..|    |:....|..:.| |.|:     :.||:...|..|.:  .::::.::.|:....|
 Frog    65 C-YQPPKTLVALLGEHDLKKKEG-TEQH-----IQVEAAYKHFGYKDEAYDHDIMLVKLAKPAQY 122

  Fly   126 TDRITAIPLVASGEALPAEGSEVIVAGWGRTSDGTNSYKIRQ------ISLKVAPEATCLDAYSD 184
            ...:..||:..|   .|.:|::.:|:|:|...    :|.||.      :.|.:..:::|..:|..
 Frog   123 NQYVQPIPVARS---CPTDGAKCLVSGYGNLL----AYNIRYPDQLQCLDLPILSDSSCKASYPR 180

  Fly   185 H-DEQSFCLAH-ELKEGTCHGDGGGGAIYGNTLIGLTNFVVGACGSRYPDVFVRLSSYADWIQ 245
            . .|..||... |.::.:|.||.||..|....|.|:.::.........|.|:.::.:|.|||:
 Frog   181 QISENMFCAGFLEGEKDSCQGDSGGPLICSGELYGVVSWGRYCARKNAPGVYAKVCNYLDWIK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 53/218 (24%)
Tryp_SPc 42..244 CDD:214473 51/215 (24%)
LOC100490788NP_001333500.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.