DRSC/TRiP Functional Genomics Resources

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Protein Alignment sphe and hgfac

DIOPT Version :10

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_002939269.3 Gene:hgfac / 100485696 XenbaseID:XB-GENE-940012 Length:595 Species:Xenopus tropicalis


Alignment Length:248 Identity:58/248 - (23%)
Similarity:105/248 - (42%) Gaps:27/248 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHRDGKLIDASRLACRVGS 86
            |:|||:||..|...:..:.|.:.:.| :.|.||::....:::.||| ..|.......|:......
 Frog   348 ARGRILGGNSALPGSHPWVAGIYIGN-YFCAGSLIQPCWVVSAAHC-FADSPSKSKIRVVLGQHF 410

  Fly    87 TNQYAG-GKIVNVESVAVHPDYYNLNNN---LAVITLS------SELTYTDRITAIPLVASGEAL 141
            .||... .:...||....:..|.....|   :.:|.|.      ::.|...:...:|.|::    
 Frog   411 FNQTTDVTQTFEVERYIFYDKYSVFKRNEHDIVLIKLKRINNACAKKTQFVQTICLPDVSA---- 471

  Fly   142 P-AEGSEVIVAGWGRTSDGTNSY--KIRQISLKVAPEATCL--DAY-SDHDEQSFCLAH-ELKEG 199
            | |:.....:|||||..:.:..|  .:::..:.:.|:..|.  :.| ::..|..||..: :....
 Frog   472 PFADDHHCQIAGWGRMHEDSTEYAQNLQEAIVPLVPDNKCSSPEIYGAEISENMFCAGYFDCTID 536

  Fly   200 TCHGDGGGGAIYGNTLI----GLTNFVVGACGSRYPDVFVRLSSYADWIQEQI 248
            :|.||.||........|    |:.::..|......|.|:.::|:|.|||..:|
 Frog   537 SCQGDSGGPLACEKDKISYLWGIVSWGEGCGNHNKPGVYTKVSNYVDWINRKI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 49/225 (22%)
hgfacXP_002939269.3 FN2 52..98 CDD:238019
EGF_CA 109..145 CDD:238011
FN1 147..185 CDD:238018
KR 235..319 CDD:412161
Tryp_SPc 352..588 CDD:238113 54/241 (22%)
Blue background indicates that the domain is not in the aligned region.

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