DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sphe and LOC100485189

DIOPT Version :9

Sequence 1:NP_573148.2 Gene:sphe / 32648 FlyBaseID:FBgn0030774 Length:249 Species:Drosophila melanogaster
Sequence 2:XP_002941065.2 Gene:LOC100485189 / 100485189 -ID:- Length:249 Species:Xenopus tropicalis


Alignment Length:255 Identity:67/255 - (26%)
Similarity:120/255 - (47%) Gaps:24/255 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LVILGLIGLTAVGMCHAQGRIMGGEDADATATTFTASLRVDNAHVCGGSILSQTKILTTAHCVHR 70
            |.:..|:| ||| ......||:||.:....:..:..||...:.|||||.::.:..:||.|||   
 Frog     4 LFVSALLG-TAV-QARYYDRIIGGTECRPNSQPWHCSLYYFDQHVCGGVLIDENWVLTAAHC--- 63

  Fly    71 DGKLIDASRLACRVGSTN--QYAGGKIVN-VESVAVHPDY--YNLNNNLAVITLSSELTYTDRIT 130
                 ..|.|..|:|..|  .|.|.:..: .|.:..|..:  ...:|::.::.|.|.:|..|.:.
 Frog    64 -----QLSSLQVRLGEHNLAVYEGKEQFSYAEKMCPHSGFNPITFDNDIMLLKLVSPVTINDYVQ 123

  Fly   131 AIPLVASGEALPAEGSEVIVAGWGRTSDGTNSY--KIRQISLKVAPEATCLDAYSDHDEQSFCLA 193
            .|||   |.....:|...:|:|||.|:....::  :::.:.::...:..|..|:...:.....|.
 Frog   124 TIPL---GCPTVGDGETCLVSGWGTTTSPEETFPDELQCVEVQTVSQDYCQGAFPTDEITDNMLC 185

  Fly   194 HELKEG---TCHGDGGGGAIYGNTLIGLTNFVVGACG-SRYPDVFVRLSSYADWIQEQIA 249
            ..:.||   :|.||.||..:..:.:.|:|::....|| :..|.::.::.:|..|||:.||
 Frog   186 AGVMEGGKDSCQGDSGGPLVCNSMVHGITSWGNTPCGVANKPGIYTKICNYIAWIQDTIA 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
spheNP_573148.2 Tryp_SPc 42..247 CDD:238113 55/215 (26%)
Tryp_SPc 42..244 CDD:214473 52/212 (25%)
LOC100485189XP_002941065.2 Tryp_SPc 22..243 CDD:238113 58/231 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.