DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9676 and Elane

DIOPT Version :10

Sequence 1:NP_728008.1 Gene:CG9676 / 32647 FlyBaseID:FBgn0030773 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001100237.1 Gene:Elane / 299606 RGDID:1307968 Length:271 Species:Rattus norvegicus


Alignment Length:252 Identity:71/252 - (28%)
Similarity:120/252 - (47%) Gaps:39/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLLVLCAAGVLAQNDSVVEPRIVGGTKAREGQFPHQISLRRRGSHTCGGSIISKDYVVTAAHCVK 71
            :||::|.|         :...||||..|:...:|..:||:|||.|.||.::|::::|::||||| 
  Rat    21 ALLLVCPA---------LASEIVGGRPAQPHAWPFMVSLQRRGGHFCGATLIARNFVMSAAHCV- 75

  Fly    72 QGNNVAPANELEIQAGSLLLSSGGV--RVPVATVTVHPNYNSNG-------HDVAVLRLRNSLTF 127
            .|.|        .|:..::|.:..:  |.|...:........||       :|:.:::|..|.|.
  Rat    76 NGRN--------FQSVQVVLGAHDLRRREPTRQIFSVQRIFENGFDPSRLLNDIVIIQLNGSATI 132

  Fly   128 NSNIAAIKLATEDP--PNDATVDISGWGAISQRGPISNSLLYVQVKALSRESCQKTYLRQLPETT 190
            |:|:...:|..:..  .|.......|||.:....|:.:.|..:.|..:: ..|::       ...
  Rat   133 NANVQVAELPAQGQGVGNRTPCVAMGWGRLGTNRPLPSVLQELNVTVVT-NLCRR-------RVN 189

  Fly   191 MCLLHP-KDKGACYGDSGGPATYQGKLVGLASFVIGGCGRA-APDGYERVSKLRNWI 245
            :|.|.| :..|.|:||||||......:.|:.||:.||||.. .||.:..|::..:||
  Rat   190 VCTLVPRRQAGICFGDSGGPLVCNNLVQGIDSFIRGGCGSGFYPDAFAPVAEFADWI 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9676NP_728008.1 Tryp_SPc 28..248 CDD:238113 67/231 (29%)
ElaneNP_001100237.1 Tryp_SPc 33..249 CDD:238113 67/231 (29%)

Return to query results.
Submit another query.