DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9676 and Tmprss2

DIOPT Version :10

Sequence 1:NP_728008.1 Gene:CG9676 / 32647 FlyBaseID:FBgn0030773 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:240 Identity:81/240 - (33%)
Similarity:121/240 - (50%) Gaps:21/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 EPRIVGGTKAREGQFPHQISLRRRGSHTCGGSIISKDYVVTAAHCVKQGNNVAPANELEIQAGSL 89
            :.|||||:.|..|.:|.|:||..:|.|.||||||:.:::|||||||::  .::........||.|
  Rat   251 QSRIVGGSTASPGDWPWQVSLHVQGIHVCGGSIITPEWIVTAAHCVEE--PLSSPRYWTAFAGIL 313

  Fly    90 --LLSSGGVRVPVATVTVHPNYNS--NGHDVAVLRLRNSLTFNSNIAAIKLATEDPPNDATVD-- 148
              .|...|.|..|..|..||||:|  ..:|:|:::|:..|.||..:..:.|.......|...:  
  Rat   314 KQSLMFYGSRHQVEKVISHPNYDSKTKNNDIALMKLQTPLAFNDVVKPVCLPNPGMMLDLAQECW 378

  Fly   149 ISGWGAISQRGPISNSLLYVQVKALSRESCQKTYL--RQLPETTMC---LLHPKDKGACYGDSGG 208
            ||||||..::|..|:.|....|..:....|...|:  ..:....:|   |....|  :|.|||||
  Rat   379 ISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLITPAMICAGFLQGSVD--SCQGDSGG 441

  Fly   209 P-ATYQGK---LVGLASFVIGGCGRA-APDGYERVSKLRNWIAEK 248
            | .|.:.:   |:|..|:. .||.:| .|..|..|:...:||.::
  Rat   442 PLVTLKNEIWWLIGDTSWG-SGCAKAYRPGVYGNVTVFTDWIYQQ 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9676NP_728008.1 Tryp_SPc 28..248 CDD:238113 80/235 (34%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 80/235 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.