DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9676 and St14

DIOPT Version :9

Sequence 1:	NP_728008.1	Gene:	CG9676 / 32647	FlyBaseID:	FBgn0030773	Length:	251	Species:	Drosophila melanogaster
Sequence 2:	NP_446087.1	Gene:	St14 / 114093	RGDID:	69288	Length:	855	Species:	Rattus norvegicus

Alignment Length:	251	Identity:	71/251 - (28%)
Similarity:	127/251 - (50%)	Gaps:	31/251 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 EPRIVGGTKAREGQFPHQISLRRRG-SHTCGGSIISKDYVVTAAHCVKQGNNVAPANELEIQAGS 88
            :.|:||||.|.||::|.|:||...| .|.||.|:||.|::|:||||. |...:...::..:....
  Rat   612 QARVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCF-QDETIFKYSDHTMWTAF 675

  Fly    89 LLL------SSGGVRV-PVATVTVHPNYN--SNGHDVAVLRLRNSLTFNSNIAAIKLA--TEDPP 142
            |.|      |:.||:. .:..:..||::|  :..:|:|:|.|.....:::.:..|.|.  |...|
  Rat   676 LGLLDQSKRSASGVQEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICLPDNTHVFP 740

  Fly   143 NDATVDISGWGAISQRGPISNSLLYVQVKALSRESCQKTYLRQLPETTMCLLHPKDKG------- 200
            ....:.::|||...:.|..:..|...:::.:::.:|::...:|:....||:      |
  Rat   741 AGKAIWVTGWGHTKEGGTGALILQKGEIRVINQTTCEELLPQQITPRMMCV------GFLSGGVD 799

  Fly   201 ACYGDSGGPAT---YQGKL--VGLASFVIGGCGRAAPDGYERVSKLRNWIAEKASL 251
            :|.||||||.:   ..|::  .|:.|:..|...|..|..|.|:.::|:||.|:..:
  Rat   800 SCQGDSGGPLSSVEKDGRIFQAGVVSWGEGCAQRNKPGVYTRIPEVRDWIKEQTGV 855

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9676	NP_728008.1	Tryp_SPc	27..245	CDD:214473	68/241 (28%)
CG9676	NP_728008.1	Tryp_SPc	28..248	CDD:238113	69/243 (28%)
St14	NP_446087.1	SEA	88..178	CDD:396113
		CUB	214..332	CDD:238001
		CUB	340..444	CDD:238001
		LDLa	454..486	CDD:238060
		LDLa	492..523	CDD:238060
		LDLa	525..559	CDD:238060
		LDLa	567..602	CDD:238060
		Tryp_SPc	615..852	CDD:238113	69/243 (28%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910