DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep4 and SHS1

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_010056.1 Gene:SHS1 / 851373 SGDID:S000002384 Length:551 Species:Saccharomyces cerevisiae


Alignment Length:411 Identity:105/411 - (25%)
Similarity:200/411 - (48%) Gaps:81/411 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 RKSVKRGFEFTLMVVGESGLGKSTLINSLFLGDLYKNRQM---------PNVEERIEKTTKV--- 129
            :|..|||..:|:::.|.:|.||:...|:|....::.::..         .|.|.::...|||   
Yeast    15 KKEHKRGITYTMLLCGPAGTGKTAFANNLLETKIFPHKYQYGKSNASISSNPEVKVIAPTKVVSF 79

  Fly   130 -----------EKKTMDIE-ERGVRLRLT------------------------VVDTPGFGDAIN 158
                       |...|... |.|:.:..|                        ::.|.|.|:  |
Yeast    80 NSKNGIPSYVSEFDPMRANLEPGITITSTSLELGGNKDQGKPEMNEDDTVFFNLIMTHGIGE--N 142

  Fly   159 CEDSWRVCTQ----YIDEQFRQYFTDESGLNRR-NIQDNRVHCCLYFVPPWGHSLRQMDLDLIRR 218
            .:||  :|::    |:::||.....:|:.:.|. ..:|.|||..|||:.|.||.||::|::|::.
Yeast   143 LDDS--LCSEEVMSYLEQQFDIVLAEETRIKRNPRFEDTRVHVALYFIEPTGHGLREVDVELMKS 205

  Fly   219 LHRKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHIQLYQFPECDSDEDDDFKQQDRELKASI 283
            :.:..|::.:|.:||...|:|:.:.::.|:.|:|..::.:|:| |.|.::||....::.:..||:
Yeast   206 ISKYTNVLPIITRADSFTKEELTQFRKNIMFDVERYNVPIYKF-EVDPEDDDLESMEENQALASL 269

  Fly   284 -PFAVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYEN 347
             |||::.|:| .:..|:.|  |:||||:::::|.:.||...|:..|..:|:|:.|||||::.|||
Yeast   270 QPFAIITSDT-RDSEGRYV--REYPWGIISIDDDKISDLKVLKNVLFGSHLQEFKDTTQNLLYEN 331

  Fly   348 FRAQCISQISQHALRERGKLKRD----------SISSTNGFDAAISETDRLLLQKDEEIRRMQDM 402
            :|::.:|.::..........||.          |:.||..|:::.:..:.|         |....
Yeast   332 YRSEKLSSVANAEEIGPNSTKRQSNAPSLSNFASLISTGQFNSSQTLANNL---------RADTP 387

  Fly   403 LTQMQEKLKQTHLMEMKKNDS 423
            ..|:....|:....:..::||
Yeast   388 RNQVSGNFKENEYEDNGEHDS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 103/406 (25%)
CDC_Septin 82..357 CDD:206649 91/328 (28%)
SHS1NP_010056.1 CDC3 1..519 CDD:227352 105/411 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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