DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sep4 and CDC3

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_013418.2 Gene:CDC3 / 851024 SGDID:S000004306 Length:520 Species:Saccharomyces cerevisiae


Alignment Length:401 Identity:139/401 - (34%)
Similarity:224/401 - (55%) Gaps:52/401 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 YIGFATLPEQVHRKSVKRGFEFTLMVVGESGLGKSTLINSLFLGDLYKNRQMPNVEERI------ 123
            |:|||.||:|.||:|:|.||.|.|:.||..|:||:||:.:||..|..:...:.:.||.:      
Yeast    99 YVGFANLPKQWHRRSIKNGFSFNLLCVGPDGIGKTTLMKTLFNNDDIEANLVKDYEEELANDQEE 163

  Fly   124 -------------EKTTKVEKKTMD--IEERGVRLRLTVVDTPGFGDAINCED-SWRVCTQYIDE 172
                         |:..||:.|:.:  |||.||:|.|.|:||.||||.:|.:. ||....:.||.
Yeast   164 EEGQGEGHENQSQEQRHKVKIKSYESVIEENGVKLNLNVIDTEGFGDFLNNDQKSWDPIIKEIDS 228

  Fly   173 QFRQYFTDESGLNRRNIQDNRVHCCLYFVPPWGHSLRQMDLDLIRRLHRKVNIVLVIGKADCLNK 237
            :|.||...|:.:||.:|.|.|:|.||||:.|.||.|:.:||..::.::.|.|::.||.|:|.|..
Yeast   229 RFDQYLDAENKINRHSINDKRIHACLYFIEPTGHYLKPLDLKFMQSVYEKCNLIPVIAKSDILTD 293

  Fly   238 QEVRKLKERILQDLEDNHIQLYQFPECDSDEDDDFKQQDRELKASIPFAVVGSNTILE-VAGKKV 301
            :|:...|:.|:..|..::|:|:: |...|::|.:.......|.:|:|:||:|||.|:| .:|.:|
Yeast   294 EEILSFKKTIMNQLIQSNIELFK-PPIYSNDDAENSHLSERLFSSLPYAVIGSNDIVENYSGNQV 357

  Fly   302 RGRQYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYENFRAQCISQI---------- 356
            |||.|||||:.|::..||||..|:..||...|::||:.|..:.|||:|:..::::          
Yeast   358 RGRSYPWGVIEVDNDNHSDFNLLKNLLIKQFMEELKERTSKILYENYRSSKLAKLGIKQDNSVFK 422

  Fly   357 ---------SQHALRERGKLKRDSISSTNGFDAAISETDRLLLQKDEEI----RRMQDMLTQ--- 405
                     .:..|.| .||.:..|.....|...:||.::.|.:.:.|:    :.|::.||:   
Yeast   423 EFDPISKQQEEKTLHE-AKLAKLEIEMKTVFQQKVSEKEKKLQKSETELFARHKEMKEKLTKQLK 486

  Fly   406 -MQEKLKQTHL 415
             :::|.||..|
Yeast   487 ALEDKKKQLEL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 139/401 (35%)
CDC_Septin 82..357 CDD:206649 111/316 (35%)
CDC3NP_013418.2 CDC3 97..503 CDD:227352 139/401 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2060
SonicParanoid 1 1.000 - - X204
TreeFam 00.000 Not matched by this tool.
76.950

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