DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sep4 and TOC132

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001324729.1 Gene:TOC132 / 816165 AraportID:AT2G16640 Length:1206 Species:Arabidopsis thaliana


Alignment Length:473 Identity:88/473 - (18%)
Similarity:159/473 - (33%) Gaps:182/473 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GVASVISTMNGSSSSGIEAVKCRPPIYPKPKTPSFDKDRDYIGFATLPEQVHRKSV-KRGFEFTL 88
            |:|..:...|||                  :..:|..||    .:.:.||:..... ...|..|:
plant   535 GLAEQLRGRNGS------------------RVGAFSFDR----ASAMAEQLEAAGQDPLDFSCTI 577

  Fly    89 MVVGESGLGKSTLINSLFLGDLYKNRQMPNVEERIEKTTKV----EKKTMDIE--ERGVRLRLTV 147
            ||:|:||:|||..|||:|              :.::..|..    .|:..|:|  .:|:::|  |
plant   578 MVLGKSGVGKSATINSIF--------------DEVKFCTDAFQMGTKRVQDVEGLVQGIKVR--V 626

  Fly   148 VDTPGFGDAINCEDSWRVCTQYIDEQFRQYFTDESGLN--RRNIQDNRVHCCLYF---------- 200
            :||||.      ..||       .:|.:    :|..||  :..|:.|.....||.          
plant   627 IDTPGL------LPSW-------SDQAK----NEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDS 674

  Fly   201 ------------------------------VPPWG--HSLRQMDLDLIRRLH------------- 220
                                          |||.|  .:....|:.:.:|.|             
plant   675 GDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDM 739

  Fly   221 RKVN-IVLVIGKADCLNKQEVRKLKERILQD--LEDNHIQLYQF-PECDSDEDDDFKQQD----- 276
            |.:| :.||...:.|    ...:..:|:|.:  :...|:.|..| .:..::.:...|.||     
plant   740 RLMNPVSLVENHSAC----RTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNIPGR 800

  Fly   277 ----RELKASIPFAVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLK 337
                |.....:||.:  |:.:......|:..:||       .|.|..|           .:::..
plant   801 PFAARSKAPPLPFLL--SSLLQSRPQPKLPEQQY-------GDEEDED-----------DLEESS 845

  Fly   338 DTTQDVHYEN---FRAQCISQISQHALRERGKLKRDSISSTNGFDAAISETDRLLLQKDEEIRRM 399
            |:.::..|:.   |::...:|:                       |.:|::.:.....:.|.|..
plant   846 DSDEESEYDQLPPFKSLTKAQM-----------------------ATLSKSQKKQYLDEMEYREK 887

  Fly   400 QDMLTQMQEKLKQTHLME 417
            ..|..||:|:.|:..:.:
plant   888 LLMKKQMKEERKRRKMFK 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 80/433 (18%)
CDC_Septin 82..357 CDD:206649 69/353 (20%)
TOC132NP_001324729.1 3a0901s04IAP86 454..1206 CDD:273381 88/473 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.