DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep4 and Septin6

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_017457646.1 Gene:Septin6 / 691335 RGDID:1585082 Length:490 Species:Rattus norvegicus


Alignment Length:416 Identity:150/416 - (36%)
Similarity:227/416 - (54%) Gaps:67/416 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GSSSSGIEAVKCRP-PIYPKPKTPSFDKDRDYIGFATLPEQVHRKSVKRGFEFTLMVVGESGLGK 98
            |.|..|:....||. |:            ..::||.:||:|:..|||.:||.|.::.|||:||||
  Rat    59 GHSPRGLWGEDCRTVPL------------AGHVGFDSLPDQLVNKSVSQGFCFNILCVGETGLGK 111

  Fly    99 STLINSLFLGDLYKNRQMPNVEERIEKTT------KVEKKTMDIEERGVRLRLTVVDTPGFGDAI 157
            |||:::||           |.:...|.||      ::...|.|::|..|.|:||:|.|.||||.|
  Rat   112 STLMDTLF-----------NTKFEGEPTTHTQPGVQLRSSTYDLQESNVGLKLTIVSTVGFGDQI 165

  Fly   158 NCEDSWRVCTQYIDEQFRQYFTDESGLNR--RNIQDNRVHCCLYFVPPWGHSLRQMDLDLIRRLH 220
            |.|||::...::||.||..|..:|..:.|  .:..|:|:|.||||:.|.||||:.:||..:::|.
  Rat   166 NKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHSYHDSRIHACLYFIAPTGHSLKSLDLVTMKKLD 230

  Fly   221 RKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHIQLYQFPECDSDEDDDFKQQDRELKASIPF 285
            .||||:.:|.|:|.::|.|:.|.|.:|..:|..|.:|:||||    .:|:...:.:..:.|.:||
  Rat   231 SKVNIIPIIAKSDAISKSELAKFKIKITSELVSNGVQIYQFP----TDDESVAEINGTMNAHLPF 291

  Fly   286 AVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYENFRA 350
            |||||...:::..|.:|.||||||.|.||:..|.||:|||..||..:|:||::.|...|||.:| 
  Rat   292 AVVGSTEEVKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIRINMEDLREQTHARHYELYR- 355

  Fly   351 QCISQISQHALRERGKLKRD------SISSTNGFDAAISETDRLLLQKDEEIRRM---------- 399
            :|       .|.|.|....|      |:..|  ::|..:|....|.:|:||:|:|          
  Rat   356 RC-------KLEEMGFKDTDPDSKPFSLQET--YEAKRNEFLGELQKKEEEMRQMFVQRVKEKEA 411

  Fly   400 -----QDMLTQMQEKLKQTHLMEMKK 420
                 :..|.:..::||:.|..|.||
  Rat   412 ELKEAEKELHEKFDRLKKLHQEEKKK 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 142/383 (37%)
CDC_Septin 82..357 CDD:206649 115/282 (41%)
Septin6XP_017457646.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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