DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep4 and Septin3

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_038935716.1 Gene:Septin3 / 56003 RGDID:621745 Length:839 Species:Rattus norvegicus


Alignment Length:311 Identity:140/311 - (45%)
Similarity:209/311 - (67%) Gaps:9/311 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PPIYPKPKTP----SFDKD-RDYIGFATLPEQVHRKSVKRGFEFTLMVVGESGLGKSTLINSLFL 107
            |...|||..|    |.:.: ..|||..|:.||:.:|::|.||:|.:||||:||||||||:|:||.
  Rat   500 PEPRPKPAVPMKPVSINSNLLGYIGIDTIIEQMRKKTMKTGFDFNIMVVGQSGLGKSTLVNTLFK 564

  Fly   108 GDLYKNRQMPNVEERIEKTTKVEKKTMDIEERGVRLRLTVVDTPGFGDAINCEDSWRVCTQYIDE 172
            ..:.:.....|.||:|.||.:::.....|||.||:::|||:|||||||.||.|:.|....:||:|
  Rat   565 SQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTVIDTPGFGDQINNENCWEPIEKYINE 629

  Fly   173 QFRQYFTDESGLNR-RNIQDNRVHCCLYFVPPWGHSLRQMDLDLIRRLHRKVNIVLVIGKADCLN 236
            |:.::..:|..:.| :.|.|.||||||||:.|.|||||.:||:.::.|.:.||::.||.|||.:.
  Rat   630 QYEKFLKEEVNIARKKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNVIPVIAKADTMT 694

  Fly   237 KQEVRKLKERILQDLEDNHIQLYQFPECDSDED-DDFKQQDRELKASIPFAVVGSNTILEVAGKK 300
            .:|..:.|:|:.::||.|.|:.|  |:.:.||| :|..:.|:..:.|:|||||||:...:|.||:
  Rat   695 LEEKSEFKQRVRKELEVNGIEFY--PQKEFDEDLEDKTENDKIRQESMPFAVVGSDKEYQVNGKR 757

  Fly   301 VRGRQYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYENFRAQ 351
            |.||:.|||::.||:..|.:|..||.|:|.||:||||:.|.::|||.:||:
  Rat   758 VLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQDLKEVTHNIHYETYRAK 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 134/289 (46%)
CDC_Septin 82..357 CDD:206649 126/272 (46%)
Septin3XP_038935716.1 CDC_Septin 540..814 CDD:206649 126/271 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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