DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sep4 and Septin10

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_006256477.1 Gene:Septin10 / 309891 RGDID:1359307 Length:462 Species:Rattus norvegicus


Alignment Length:427 Identity:149/427 - (34%)
Similarity:238/427 - (55%) Gaps:61/427 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MNGSSSSGI--EAVKCRPPIYPKPKTPSFDKDRDYIGFATLPEQVHRKSVKRGFEFTLMVVGESG 95
            |...:::|:  |:.:|:     |..|.|... ..::||.:||:|:..:|:::||.|.::.|||:|
  Rat     1 MRRGAAAGLYMESSRCK-----KEHTRSLTM-CGHVGFESLPDQLVDRSIEQGFCFNILCVGETG 59

  Fly    96 LGKSTLINSLFLGDLYKNRQMPNVEERIEKT-----TKVEKKTMDIEERGVRLRLTVVDTPGFGD 155
            :|||||||:||         ..|.|| :|.:     .::..:|.:::|..|||:||:|:|.||||
  Rat    60 IGKSTLINTLF---------NTNFEE-LESSHFCPCVRLRAQTYELQESNVRLKLTIVNTVGFGD 114

  Fly   156 AINCEDSWRVCTQYIDEQFRQYFTDESGLNRR--NIQDNRVHCCLYFVPPWGHSLRQMDLDLIRR 218
            .||.|:|::....|||.||..|..:|..:.|.  |..|:|:|.||||:.|.|||||.:||..::.
  Rat   115 QINKEESYQPIVDYIDNQFEAYLQEELKIKRALFNYHDSRIHVCLYFIAPTGHSLRTLDLLTMKS 179

  Fly   219 LHRKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHIQLYQFPECDSDEDDDFKQQDRELKASI 283
            |..||||:.:|.|||.::|.|::|.|.:::.:|..|.:|:||||    .:||...:.:..:...:
  Rat   180 LDNKVNIIPLIAKADTISKSELQKFKMKLMSELVINGVQIYQFP----TDDDTTAKINGAMNGHL 240

  Fly   284 PFAVVGSNTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYENF 348
            |||||||...::|..|.|:.||||||:|.||:..|.||:|||..||.|:|:||::.|...|||.:
  Rat   241 PFAVVGSMDEIKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLICTNMEDLREQTHMRHYELY 305

  Fly   349 RAQCISQ---------------------ISQHAL-----RERGKLKRDSISSTNGFDAAISETDR 387
            | :|..|                     ..:|..     |:..::|:..:......:|.:.|.:|
  Rat   306 R-RCKLQEMGFIDIGPENKPLSLQETYEAKRHEFCGERQRKEEQMKQMFVQRVKEKEAILKEAER 369

  Fly   388 LLLQKDEEIRRMQDMLTQMQEKLKQTHLMEMKKNDSV 424
            .|..|.|.::|:     ..:|::|......|.:.:||
  Rat   370 ELQAKFEHLKRI-----HQEERMKLEEKRRMLEEESV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 140/387 (36%)
CDC_Septin 82..357 CDD:206649 121/302 (40%)
Septin10XP_006256477.1 CDC3 27..399 CDD:227352 140/391 (36%)
CDC_Septin 46..314 CDD:206649 121/282 (43%)
GBP_C <343..399 CDD:303769 12/60 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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