DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep4 and Septin8

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_038941860.1 Gene:Septin8 / 303135 RGDID:1308449 Length:483 Species:Rattus norvegicus


Alignment Length:379 Identity:149/379 - (39%)
Similarity:226/379 - (59%) Gaps:37/379 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PKPKTPSFDKDRDYIGFATLPEQVHRKSVKRGFEFTLMVVGESGLGKSTLINSLFLGDLYKNRQM 116
            |:|::.|..   .::||.:||:|:..|||.:||.|.::.|||:|:|||||:|:|| ...::..:.
  Rat    14 PEPRSLSLG---GHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLF-NTTFETEEA 74

  Fly   117 PNVEERIEKTTKVEKKTMDIEERGVRLRLTVVDTPGFGDAINCEDSWRVCTQYIDEQFRQYFTDE 181
            .:.||.:    ::..:|.|::|..|.|:||:||..||||.||.:||:|....|||.||..|..:|
  Rat    75 SHHEECV----RLRPQTYDLQESNVHLKLTIVDAVGFGDQINKDDSYRPIVDYIDTQFENYLQEE 135

  Fly   182 SGLNRR--NIQDNRVHCCLYFVPPWGHSLRQMDLDLIRRLHRKVNIVLVIGKADCLNKQEVRKLK 244
            ..:.|.  :..|.|:|.||||:.|.||||:.:||..:::|..||||:.:|.|||.::|.|:.|.|
  Rat   136 LKIRRSLFDYHDTRIHVCLYFITPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADTISKSELHKFK 200

  Fly   245 ERILQDLEDNHIQLYQFPECDSDEDDDFKQQDRELKASIPFAVVGSNTILEVAGKKVRGRQYPWG 309
            .:|:.:|..|.:|:||||    .:|:...:.:..:.|.:|||||||...::|..|.||.||||||
  Rat   201 IKIMGELVSNGVQIYQFP----TDDEAVAEINAVMNAHLPFAVVGSTEEVKVGNKLVRARQYPWG 261

  Fly   310 VVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYENFRAQCISQISQHALRERGKLKRD---- 370
            ||.||:..|.||:|||..||..:|:||::.|...|||.:| :|       .|.|.|....|    
  Rat   262 VVQVENENHCDFVKLREMLIRVNMEDLREQTHSRHYELYR-RC-------KLEEMGFQDSDGDSQ 318

  Fly   371 --SISSTNGFDAAISETDRLLLQKDEEIRRMQDMLTQMQEKLKQTHLMEMKKND 422
              |:..|  ::|...|....|.:|:||:|:|      ...|:|:|.| |:|:.:
  Rat   319 PFSLQET--YEAKRKEFLSELQRKEEEMRQM------FVNKVKETEL-ELKEKE 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 145/362 (40%)
CDC_Septin 82..357 CDD:206649 118/276 (43%)
Septin8XP_038941860.1 CDC_Septin 41..309 CDD:206649 120/284 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D845354at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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