DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep4 and spn6

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:NP_001342876.1 Gene:spn6 / 2538950 PomBaseID:SPCC188.12 Length:380 Species:Schizosaccharomyces pombe


Alignment Length:368 Identity:116/368 - (31%)
Similarity:194/368 - (52%) Gaps:29/368 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TLPEQVHRKSVKRGFEFTLMVVGESGLGKSTLINSLFLGDLYKNRQMPNVEERI-EKTTKVEKKT 133
            :||.:......::....|:|:.|.||.||:|..|:||...|...:.....:|.| :||.:|:|..
pombe    15 SLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEVKKNK 79

  Fly   134 MDIEERGVRLRLTVVDTPGFGDAINCEDSWRVCTQYIDEQFRQYFTDESGLNRRNIQDNRVHCCL 198
            ..|||.|..:.|||:|||||||.|:....|....:|:|||..:|...:....|...:|.|||.||
pombe    80 AVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPRKDTRVHVCL 144

  Fly   199 YFVPPWGHSLRQMDLDLIRRLHRKVNIVLVIGKADCLNKQEVRKLKERILQDLEDNHIQLYQFPE 263
            ||:.|....:..:|:..::.|...||:|.||.|||.....|:.::|::|.:.||...|.::.   
pombe   145 YFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIRRILEAQSIDVFH--- 206

  Fly   264 CDSDEDDDFKQQDRELKASIPFAVVGS-NTILEVAGKKVRGRQYPWGVVNVEDPEHSDFIKLRTF 327
             .|.|..|::..:. |.:|:|:|::.| |.:.:..|:|.:||:||||...:.:..|.||:||:..
pombe   207 -PSTEYSDYETAEL-LDSSLPYAIISSVNEVCKDDGEKSQGRRYPWGTSEIYEETHCDFLKLKKL 269

  Fly   328 LISTHMQDLKDTTQDVHYENFRAQCISQISQHALRERG--KLKRDSISSTNGFDAAI-------- 382
            ||:.||.:|.:||:...||.:|.:.::.      |:.|  |||::.....|....||        
pombe   270 LINRHMLELINTTETNIYERYRREQLTN------RKSGIPKLKKEHYERLNNEKRAIQQKITQMT 328

  Fly   383 SETDRLLLQKDEEIRRMQDM----LTQMQEKLK--QTHLMEMK 419
            :||:.....|:|::...:|.    |::..|:::  :|.:..:|
pombe   329 NETESFFQAKEEKMIETRDALNSELSEYHERIRALETQIESLK 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 116/368 (32%)
CDC_Septin 82..357 CDD:206649 97/276 (35%)
spn6NP_001342876.1 CDC3 17..375 CDD:227352 115/366 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 233 1.000 Domainoid score I490
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18884
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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