DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sep4 and Septin2

DIOPT Version :9

Sequence 1:NP_573147.2 Gene:Sep4 / 32646 FlyBaseID:FBgn0259923 Length:427 Species:Drosophila melanogaster
Sequence 2:XP_038938891.1 Gene:Septin2 / 117515 RGDID:620056 Length:387 Species:Rattus norvegicus


Alignment Length:381 Identity:210/381 - (55%)
Similarity:281/381 - (73%) Gaps:33/381 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KCRPPIYPKPKTPSFDKDRDYIGFATLPEQVHRKSVKRGFEFTLMVVGESGLGKSTLINSLFLGD 109
            |.:|..:..|:||.      |:|||.||.||||||||:|||||||||||||||||||||||||.|
  Rat    29 KQQPTQFINPETPG------YVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTD 87

  Fly   110 LYKNRQMPNVEERIEKTTKVEKKTMDIEERGVRLRLTVVDTPGFGDAINCEDSWRVCTQYIDEQF 174
            ||..|.:|...|:||:|.::|..|::||||||:||||||||||:|||||..|.::....||||||
  Rat    88 LYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSRDCFKTIISYIDEQF 152

  Fly   175 RQYFTDESGLNRRNIQDNRVHCCLYFVPPWGHSLRQMDLDLIRRLHRKVNIVLVIGKADCLNKQE 239
            .:|..||||||||:|.|||||||.||:.|:||.|:.:|:..::.:|.|||||.||.|||.|..:|
  Rat   153 ERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKE 217

  Fly   240 VRKLKERILQDLEDNHIQLYQFPECDSDEDDDFKQQDRELKASIPFAVVGSNTILEVAGKKVRGR 304
            ..:||:|||.::|::.|::|..|:.:||||:|||:|.|.|||||||:|||||.::|..|||||||
  Rat   218 RERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGR 282

  Fly   305 QYPWGVVNVEDPEHSDFIKLRTFLISTHMQDLKDTTQDVHYENFRAQCISQISQHALRERG--KL 367
            .||||||.||:|||:||:||||.|| ||||||::.|||:||||||::.:         :||  |:
  Rat   283 LYPWGVVEVENPEHNDFLKLRTMLI-THMQDLQEVTQDLHYENFRSERL---------KRGGRKV 337

  Fly   368 KRDSISSTNGFDAAISETDRLLLQKDEEIRRMQDMLTQMQEKLKQTHLMEMKKNDS 423
            :.:.::.           |::||:|:.|:||||:|:.:||.:::    |:|:..|:
  Rat   338 ENEDMNK-----------DQILLEKEAELRRMQEMIARMQAQMQ----MQMQGGDT 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sep4NP_573147.2 CDC3 65..420 CDD:227352 204/356 (57%)
CDC_Septin 82..357 CDD:206649 173/274 (63%)
Septin2XP_038938891.1 Septin 61..332 CDD:395596 173/280 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5019
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51878
OrthoDB 1 1.010 - - D452703at33208
OrthoFinder 1 1.000 - - FOG0000103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X204
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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