DRSC/TRiP Functional Genomics Resources

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Protein Alignment r and PYRB

DIOPT Version :9

Sequence 1:NP_001285343.1 Gene:r / 32640 FlyBaseID:FBgn0003189 Length:2224 Species:Drosophila melanogaster
Sequence 2:NP_001326915.1 Gene:PYRB / 821577 AraportID:AT3G20330 Length:390 Species:Arabidopsis thaliana


Alignment Length:364 Identity:151/364 - (41%)
Similarity:231/364 - (63%) Gaps:31/364 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1882 NSPSP----RIRL-------DSASNTTLREYLQRTTNSNPV-AHSLMG----------KHILAVD 1924
            |.|||    :|.|       |...|.|    |..|.|..|| .|::..          ..::...
plant    31 NLPSPFESSKICLTSFPASRDLKKNAT----LNLTRNVGPVRCHAMQAGTRELKKFELSDVIEGK 91

  Fly  1925 MFNKDHLNDIFNLAQLLKLRGTKDRPVDELLPGKIMASVFYEVSTRTQCSFAAAMLRLGGRVISM 1989
            .|:::.|:.||::|:.:: :..|.....|:|.|.:||::|||.||||:.||.:||.||||.|::.
plant    92 QFDREMLSAIFDVAREME-KIEKSSSQSEILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTT 155

  Fly  1990 DNIT--SSVKKGESLEDSIKVVSSYADVVVLRHPSPGAVARAATFSRKPLINAGDGVGEHPTQAL 2052
            :|..  ||..|||:|||:|:.|..|:|::|:||...||..:||..:..|:||||||.||||||||
plant   156 ENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAARKAAATANIPVINAGDGPGEHPTQAL 220

  Fly  2053 LDIFTIREEFGTVNGLTITMVGDLKNGRTVHSLARLLTLY-NVNLQYVAPNSLQMPDEVVQFVHQ 2116
            ||::||:.|.|.::|:::.:||||.|||||.|||.||..: :|.:.:|:|..::|.|::..::..
plant   221 LDVYTIQSEIGKLDGISVALVGDLANGRTVRSLAYLLAKFKDVKIYFVSPEIVKMKDDIKDYLTS 285

  Fly  2117 RGVKQLFARDLKNVLPDTDVLYMTRIQRERF-DNVEDYEKCCGHLVLTPEHMMRAKKRSIVLHPL 2180
            .||:...:.||..|....||:|.|||||||| :.::.||...|..::..:.:...:|::|::|||
plant   286 SGVEWEESSDLMEVASKCDVVYQTRIQRERFGERLDLYEAARGKYIVDKDLLGVMQKKAIIMHPL 350

  Fly  2181 PRLNEISREIDSDPRAAYFRQAEYGMYIRMALLAMVVGG 2219
            |||:||:.::|:||||||||||:.|::||||||.:::.|
plant   351 PRLDEITADVDADPRAAYFRQAKNGLFIRMALLKLLLVG 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rNP_001285343.1 CPSaseIIsmall 7..376 CDD:273580
CPSase_sm_chain 7..151 CDD:279346
GATase1_CPSase 196..371 CDD:153215
CPSaseII_lrg 403..1455 CDD:273581
CPSase_L_D2 524..726 CDD:280881
CPSase_L_D3 815..935 CDD:280882
P-loop_NTPase 947..>1149 CDD:304359
ATP-grasp_4 1084..1265 CDD:302634
MGS_CPS_I_III 1327..1453 CDD:238711
CAD_DHOase 1475..1821 CDD:238641
PLN02527 1918..2220 CDD:178142 136/306 (44%)
OTCace_N 1919..2060 CDD:280825 66/142 (46%)
OTCace 2067..2216 CDD:278609 67/150 (45%)
PYRBNP_001326915.1 PLN02527 85..390 CDD:178142 136/306 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 133 1.000 Domainoid score I1655
eggNOG 1 0.900 - - E1_COG0458
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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