DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment r and cad

DIOPT Version :9

Sequence 1:NP_001285343.1 Gene:r / 32640 FlyBaseID:FBgn0003189 Length:2224 Species:Drosophila melanogaster
Sequence 2:XP_031757790.1 Gene:cad / 100125119 XenbaseID:XB-GENE-5878289 Length:2248 Species:Xenopus tropicalis


Alignment Length:2276 Identity:1405/2276 - (61%)
Similarity:1735/2276 - (76%) Gaps:88/2276 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASTDCYLALEDGTVLPGYSFGYVPSENESKVGFGGEVVFQTGMVGYTEALTDRSYSGQILVLTY 65
            ||:....|.|||||.:.|..||.|..       ..||||||||||||.|||||.||..|||||||
 Frog     1 MAAGTAVLLLEDGTRVSGTVFGAVRP-------VSGEVVFQTGMVGYPEALTDPSYRAQILVLTY 58

  Fly    66 PLIGNYGVPAPDEDEHGLPLHFEWMKGVVQATALVVGEVAEEAFHWRKWKTLPDWLKQHKVPGIQ 130
            |||||||:|..:.|:.||...||..|  :.|:||::||.:....||....:|..||||..:||::
 Frog    59 PLIGNYGIPQDELDQFGLSRWFESSK--IHASALIIGERSRNPSHWSCDISLNQWLKQQGIPGLE 121

  Fly   131 DIDTRALTKKLREQGSMLGKIVYEKPPVEGLPKSS--FVDPNVRNLAKECSVKERQVYGNPNGKG 193
            .:||||||||:||:|::|||::    || |..:|.  :.||..|||.:|.|:||.:|| |..|. 
 Frog   122 GVDTRALTKKIREKGTLLGKLI----PV-GTEESQVPYEDPAKRNLVQEVSLKEPRVY-NAGGT- 179

  Fly   194 PRIAILDCGLKLNQLRCLLQRGASVTLLPWSARLEDEQFDALFLSNGPGNPESCDQIVQQVRKVI 258
            .|||.||||||.||:|||.||||.||:|||...:...:.|.||||||||:|..|...|:.:|..|
 Frog   180 VRIAALDCGLKFNQIRCLCQRGAEVTVLPWDYPISSAECDGLFLSNGPGDPTFCQSSVRNIRDFI 244

  Fly   259 -EEGQKPVFGICLGHQLLAKAIGCSTYKMKYGNRGHNLPCLHRATGRCLMTSQNHGYAVDLEQLP 322
             ||..|||||||||||:|:..||..||||||||||||.||:|.::.||.:||||||||||...||
 Frog   245 SEEKPKPVFGICLGHQILSLVIGAHTYKMKYGNRGHNQPCIHESSRRCFITSQNHGYAVDPNTLP 309

  Fly   323 DGWSELFVNANDGTNEGIVHASKPYFSVQFHPEHHAGPQDTEFLFDVFMESIQQK------DLTI 381
            :|||.||.||||.:||||:|.|||:|||||||||.|||.|...|||||:::::.:      :.|:
 Frog   310 EGWSPLFTNANDQSNEGIIHDSKPFFSVQFHPEHCAGPMDLVGLFDVFLDTVRDRKAGDSGEKTV 374

  Fly   382 PQLIEQRLR-PTTPAI-DSAPVMPRKVLILGSGGLSIGQAGEFDYSGSQAIKAMRESNIQTVLIN 444
            .|.:.:.|. ..:|:: |.....|.||||||||||||||||||||||||||||::|.||||||||
 Frog   375 KQRVTELLTYKESPSVTDLEASRPHKVLILGSGGLSIGQAGEFDYSGSQAIKALKEENIQTVLIN 439

  Fly   445 PNIATVQTSKGMADKCYFLPLTPHYVEQVIKSERPNGVLLTFGGQTALNCGVQLERAGVFSKYNV 509
            |||||||||||:|||.||||:||.||.||||:|||:|:||||||||||||||:|.:.||..||||
 Frog   440 PNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGILLTFGGQTALNCGVELTKQGVLEKYNV 504

  Fly   510 RILGTPIQSIIETEDRKLFAERVNEIGEQVAPSEAVYSVAQALDAASRLGYPVMARAAFSLGGLG 574
            |:||||::||..|||||:|.|::.||||.||||||.:|:.||..||.||||||:.|:|::|||||
 Frog   505 RVLGTPVKSIEMTEDRKVFVEKMEEIGEHVAPSEAAFSLEQAQAAAERLGYPVLVRSAYALGGLG 569

  Fly   575 SGFANNEEELQSLAQQALAHSSQLIVDKSLKGWKEVEYEVVRDAYNNCITVCNMENFDPLGIHTG 639
            ||||:.:|||.:|..||.||::|::||||||||||:||||||||||||:|||||||.||||||||
 Frog   570 SGFASTKEELTALVCQAFAHTTQVLVDKSLKGWKEIEYEVVRDAYNNCVTVCNMENVDPLGIHTG 634

  Fly   640 ESIVVAPSQTLSDREYQMLRSTALKVIRHFGVVGECNIQYALCPHSEQYYIIEVNARLSRSSALA 704
            |||||||||||:||||.|||:||:|||:|.|:||||||||||.|.||||||||||||||||||||
 Frog   635 ESIVVAPSQTLNDREYNMLRNTAIKVIQHLGIVGECNIQYALNPESEQYYIIEVNARLSRSSALA 699

  Fly   705 SKATGYPLAYVAAKLALGLPLPDIKNSVTGNTTACFEPSLDYCVVKIPRWDLAKFVRVSKHIGSS 769
            ||||||||||||||||||:|||.::||||.:|||.|||||||||||:|||||:||:|||..||||
 Frog   700 SKATGYPLAYVAAKLALGIPLPVLRNSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSS 764

  Fly   770 MKSVGEVMAIGRNFEEAFQKALRMVDSDVLGFDPDVVPLNKEQLAEQLSEPTDRRPFVIAAALQL 834
            ||||||||::||||||||||||||||.:.:|||..:    |....|:|..|||:|.||:||||:.
 Frog   765 MKSVGEVMSVGRNFEEAFQKALRMVDENCVGFDHCI----KSASDEELETPTDKRIFVLAAALRA 825

  Fly   835 GMSLRELHQLTNIDYWFLEKLERIILLQSLLTRNGSRTDAAL-----LLKAKRFGFSDKQIAKYI 894
            |.::..|::||.||.|||.|::.|  ...:.|......|..|     ||:||:.||||||||..:
 Frog   826 GYTIERLYELTKIDRWFLHKMKNI--TDQVATLESYHQDETLMPREVLLRAKQLGFSDKQIALAV 888

  Fly   895 KSTELAVRHQRQEFGIRPHVKQIDTVAGEWPASTNYLYHTYNGSEHDVDFPGGHTIVVGSGVYRI 959
            :|||||||..|||..|.|.||||||||.||||.|||||.||||:|||:.|...|.:|:|||||||
 Frog   889 QSTELAVRKMRQELLILPVVKQIDTVAAEWPAQTNYLYLTYNGTEHDLAFEEPHVMVIGSGVYRI 953

  Fly   960 GSSVEFDWCAVGCLRELRKLQRPTIMINYNPETVSTDYDMCDRLYFEEISFEVVMDIYEMENSEG 1024
            |||||||||||||::||||:...|||:|||||||||||||||||||:||||||||||||:||.||
 Frog   954 GSSVEFDWCAVGCIQELRKMGFKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYELENPEG 1018

  Fly  1025 IILSMGGQLPNNIAMDLHRQQAKVLGTSPESIDCAENRFKFSRMLDRKGILQPRWKELTNLQSAI 1089
            |||||||||||||||.|||||.:|||||||:||.||||||||||||..||.||:||||::::||:
 Frog  1019 IILSMGGQLPNNIAMSLHRQQCRVLGTSPEAIDSAENRFKFSRMLDTIGISQPQWKELSDMESAV 1083

  Fly  1090 EFCEEVGYPCLVRPSYVLSGAAMNVAYSNQDLETYLNAASEVSREHPVVISKFLTEAKEIDVDAV 1154
            :||..||:||:|||||||||||||||:|:.|||..|:.|..||:|||||||||:.||||||||||
 Frog  1084 QFCNTVGFPCVVRPSYVLSGAAMNVAHSDGDLEKVLSNAVAVSKEHPVVISKFIQEAKEIDVDAV 1148

  Fly  1155 ASDGRILCMAVSEHVENAGVHSGDATLVTPPQDLNAETLEAIKRITCDLASVLDVTGPFNMQLIA 1219
            |.||.::.:|:|||||||||||||||||||.||:..:|||.||.|...:...|.|.||||:||||
 Frog  1149 ACDGVVVAVAISEHVENAGVHSGDATLVTPAQDITPKTLERIKAIVHAVGLELQVNGPFNLQLIA 1213

  Fly  1220 KNNELKVIECNVRVSRSFPFVSKTLDHDFVATATRAIVGLDVEPLDVLHGVGKVGVKVPQFSFSR 1284
            |:::|||||||||||||||||||||..:.||.||:.|:|.:|||:.|:.|.|.||||||||||||
 Frog  1214 KDDQLKVIECNVRVSRSFPFVSKTLGVNLVALATQVIMGEEVEPVGVMTGTGIVGVKVPQFSFSR 1278

  Fly  1285 LAGADVQLGVEMASTGEVACFGDNRYEAYLKAMMSTGFQIPKNAVLLSIGSFKHKMELLPSIRDL 1349
            ||||||.|||||.|||||||||:||||||||||:||||:||:..:||:|||:|:|.||||::|.:
 Frog  1279 LAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPQKNILLTIGSYKNKSELLPTVRAM 1343

  Fly  1350 AKMGYKLYASMGTGDFYAEHGVNVESVQWTFDKTTPDDINGELRH----LAEFLANKQFDLVINL 1410
            ..:||.||||:||.|||.|||:.|:::.|.|:::..|   |.||.    :.:.|:...|||||||
 Frog  1344 ESLGYSLYASLGTADFYTEHGIKVKAMDWPFEESEND---GPLREKQGSIMDHLSENHFDLVINL 1405

  Fly  1411 PMSGGGARRVSSFMTHGYRTRRLAVDYSIPLVTDVKCTKLLVESMRMNGGKPPMKTHTDCMTSRR 1475
            .|...|.||:|||:|.|||.||||||||:||:.|:|||||.||::|..||.||:|||.|||||::
 Frog  1406 SMRNSGGRRLSSFVTRGYRARRLAVDYSVPLIIDIKCTKLFVEALRQIGGAPPVKTHVDCMTSQK 1470

  Fly  1476 IVKLPGFIDVHVHLREPGATHKEDFASGTAAALAGGVTLVCAMPNTNPSIVDRETFTQFQELAKA 1540
            :::|||.:|:|||||||||||||||:||||||||||:|||||||||:|:|.|..:|:..|:||:|
 Frog  1471 LIRLPGLVDIHVHLREPGATHKEDFSSGTAAALAGGITLVCAMPNTSPAITDASSFSLAQKLAEA 1535

  Fly  1541 GARCDYALYVGASDDNWAQVNELASHACGLKMYLNDTFGTLKLSDMTSWQRHLSHWPKRSPIVCH 1605
            |||||:||::|||.:|.|.::.:||.|.|||||||||:..||:.:::.|..|...||...|||.|
 Frog  1536 GARCDFALFLGASSENAASLSSMASSAAGLKMYLNDTYSQLKMDNVSVWMEHFEKWPAHMPIVAH 1600

  Fly  1606 AERQSTAAVIMLAHLLDRSVHICHVARKEEIQLIRSAKEKGVKVTCEVCPHHLFLSTKDVERLGH 1670
            ||:|:.||::|:|.|..|.|||||||:||||.:|::||:||::|||||.||||||...|::::|.
 Frog  1601 AEKQTVAAILMVAQLYQRPVHICHVAKKEEILIIKAAKQKGIQVTCEVAPHHLFLCLDDLKKIGE 1665

  Fly  1671 GMSEVRPLLCSPEDQEALWENIDYIDVFATDHAPHTLAEKRSERPPPGFPGVETILPLLLQAVHE 1735
            ...:|||:|.:.||.|:||||:|.||.||||||||::.||....||||:||:||:|||||.||.|
 Frog  1666 TRGQVRPMLGTREDLESLWENLDIIDCFATDHAPHSVEEKDGPNPPPGYPGLETMLPLLLTAVSE 1730

  Fly  1736 GRLTMEDIKRKFHRNPKIIFNLPDQAQTYVEVDLDEEWTITGNEMKSKSGWTPFEGTKVKGRVHR 1800
            ||||::||.::.:.||:.||:||.|..|||||||::||.|..:...:||.|:||.|.||||.|.|
 Frog  1731 GRLTIDDIIKRLYDNPQKIFSLPVQENTYVEVDLEQEWVIPSHMQFTKSRWSPFAGMKVKGAVRR 1795

  Fly  1801 VVLRGEVAFVDGQVLVQPGFGQNVRPKQSPLASEA---SQDLLPSDNDANDTFT---RLLTSEGP 1859
            ||||||||::||||||..|:||:||....|:.:::   :...:|...:.:...|   ..:.|..|
 Frog  1796 VVLRGEVAYIDGQVLVPMGYGQDVRKWTPPVVAQSHPVAIKEIPKTPERHRHVTVQSETIRSRAP 1860

  Fly  1860 --------GGGVHGISTKVHFVDGANF----------LRP------------NSPSPRIRLDSAS 1894
                    |.|...:..:||......|          .||            :.|.|..|:.|..
 Frog  1861 SPRRPCQSGDGRFHLPPRVHRASDPGFPAEEQKEKAPKRPVEPELVPIQDGYSHPPPIPRIMSPQ 1925

  Fly  1895 NTTLRE--YLQRTTNSNPVAHSLMGKHILAVDMFNKDHLNDIFNLAQLLKLRGTKDRPVDELLPG 1957
            :|:::.  ::|    ::|:.|.|:|:|||.|..|:||.::.:||:|..|::...|:|.:| :|.|
 Frog  1926 STSMQSAPHVQ----TSPLLHPLIGQHILTVKQFSKDQMSHLFNVAHTLRMLVQKERNLD-ILKG 1985

  Fly  1958 KIMASVFYEVSTRTQCSFAAAMLRLGGRVISMDNITSSVKKGESLEDSIKVVSSYADVVVLRHPS 2022
            |:|||:|:|.||||..||||||.||||.|:|....|||.:|||||.||::.:|.|:||:|:|||.
 Frog  1986 KVMASMFFEASTRTSSSFAAAMQRLGGSVLSFCETTSSSQKGESLTDSVQTMSCYSDVLVVRHPE 2050

  Fly  2023 PGAVARAATFSRKPLINAGDGVGEHPTQALLDIFTIREEFGTVNGLTITMVGDLKNGRTVHSLAR 2087
            ||||..||...|||:||||||||||||||||||||||||.|||||:.||||||||:||||||||.
 Frog  2051 PGAVELAAKHCRKPVINAGDGVGEHPTQALLDIFTIREELGTVNGMIITMVGDLKHGRTVHSLAC 2115

  Fly  2088 LLTLYNVNLQYVAPNSLQMPDEVVQFVHQRGVKQLFARDLKNVLPDTDVLYMTRIQRERFDNVED 2152
            |||.|.|.|:||.|.||:||..::.||..:|:||.....::..|||||||||||||:|||::.::
 Frog  2116 LLTQYRVTLRYVTPRSLRMPSNIIHFVASKGIKQEEFESIEEALPDTDVLYMTRIQKERFNSTDE 2180

  Fly  2153 YEKCCGHLVLTPEHMMRAKKRSIVLHPLPRLNEISREIDSDPRAAYFRQAEYGMYIRMALLAMVV 2217
            |..|.|..:|||..|.||||:.:|:||:||:||||.|:|||||||||||||.||||||||||.|:
 Frog  2181 YNACFGQFILTPHIMTRAKKKMVVMHPMPRVNEISFEVDSDPRAAYFRQAENGMYIRMALLATVL 2245

  Fly  2218 G 2218
            |
 Frog  2246 G 2246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rNP_001285343.1 CPSaseIIsmall 7..376 CDD:273580 212/371 (57%)
CPSase_sm_chain 7..151 CDD:279346 77/143 (54%)
GATase1_CPSase 196..371 CDD:153215 115/175 (66%)
CPSaseII_lrg 403..1455 CDD:273581 749/1060 (71%)
CPSase_L_D2 524..726 CDD:280881 158/201 (79%)
CPSase_L_D3 815..935 CDD:280882 67/124 (54%)
P-loop_NTPase 947..>1149 CDD:304359 156/201 (78%)
ATP-grasp_4 1084..1265 CDD:302634 122/180 (68%)
MGS_CPS_I_III 1327..1453 CDD:238711 68/129 (53%)
CAD_DHOase 1475..1821 CDD:238641 208/345 (60%)
PLN02527 1918..2220 CDD:178142 190/301 (63%)
OTCace_N 1919..2060 CDD:280825 86/140 (61%)
OTCace 2067..2216 CDD:278609 95/148 (64%)
cadXP_031757790.1 PRK12564 5..359 CDD:237139 212/369 (57%)
CPSaseII_lrg 398..1450 CDD:273581 749/1060 (71%)
CAD_DHOase 1470..1816 CDD:238641 208/345 (60%)
PLN02527 1947..2248 CDD:178142 190/301 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 330 1.000 Domainoid score I1166
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1412
Inparanoid 1 1.050 2711 1.000 Inparanoid score I27
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15670at33208
OrthoFinder 1 1.000 - - FOG0001016
OrthoInspector 1 1.000 - - oto105574
Panther 1 1.100 - - LDO PTHR11405
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1225
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

Return to query results.
Submit another query.