DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nemp and AT3G49840

DIOPT Version :10

Sequence 1:NP_573142.1 Gene:Nemp / 32639 FlyBaseID:FBgn0030768 Length:454 Species:Drosophila melanogaster
Sequence 2:NP_001325564.1 Gene:AT3G49840 / 824146 AraportID:AT3G49840 Length:458 Species:Arabidopsis thaliana


Alignment Length:349 Identity:74/349 - (21%)
Similarity:124/349 - (35%) Gaps:126/349 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LSPFEQQCIGI-----SSRQAYTVILNSIPLDLWRLAQFAVGILILFSARRLAKNSVFYYLVGIV 174
            :|||:.:.:.|     ||..:...::......::|:....:||::|..|.||:|:..|||:..:.
plant   136 MSPFDYKILDIRTFGGSSNVSTVELVAKQEFFIYRIVFLIMGIVLLSLASRLSKSVAFYYIGAMS 200

  Fly   175 IGICASLLVVIYLAAKLFPRR----------TMMYGV---------------------------- 201
            |||...:.::|....|..|.|          :.|.||                            
plant   201 IGIVILVTLIINQGIKRLPTRGKSRFQLFFYSSMIGVGGYFLQYIRGLVQDLLMQIEISEDLYIP 265

  Fly   202 ----------LIGGWTIGFYVIKQL---------------------ADNLRLILITYRDHVL-GY 234
                      ::|.|: ||:.:|:.                     |..:.|||.:..|.:| |.
plant   266 LAILLVVFVFMLGAWS-GFWTVKKFVVTKDGSVDISTSIFVSWSIRAFAVALILQSSLDPLLAGG 329

  Fly   235 LVITGLISFLICYRIGPPKNPRSQTIVMWVLQAIGAVMAYFSSWHTS--------AVIFIMVL-- 289
            .:|||::..||...|.               :.:.|...|.....|.        |..|...|  
plant   330 ALITGILISLILKSIS---------------RKLLAQRIYEQDDETESCSPGLIHATSFASPLPR 379

  Fly   290 ----------VFVAHYFPISWTNQIKFMYRRRFPLKRRMLTQEEYEQQTAVETSKSLADLRKYVN 344
                      :..:..||.|:         .:.|..||.||:||.::.|...|..:|.:|   |:
plant   380 GSNKKLRTVPLSESDIFPSSF---------HKTPEGRRKLTKEELQKFTKESTENALKEL---VS 432

  Fly   345 SPECKQWAVMGKLR---DPLRFAS 365
            ||...:|||....|   :|::.:|
plant   433 SPGFGEWAVKNAKRITVNPIKESS 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NempNP_573142.1 NEMP 132..375 CDD:463008 68/327 (21%)
AT3G49840NP_001325564.1 NEMP 157..439 CDD:463008 62/309 (20%)

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