DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and GCR1

DIOPT Version :10

Sequence 1:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_175261.1 Gene:GCR1 / 841247 AraportID:AT1G48270 Length:326 Species:Arabidopsis thaliana


Alignment Length:340 Identity:74/340 - (21%)
Similarity:123/340 - (36%) Gaps:107/340 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 AGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLSATLVAGFLLPAVHHALHWRCQICYVT 370
            ||.|:          .|..:::..|:.||...:|.|. ||.:|                 :||  
plant     7 AGGGL----------TAGDRSIITAINTGASSLSFVG-SAFIV-----------------LCY-- 41

  Fly   371 CLLFGKI---------LLAIEELSSSL-----QPGSA-ACHTLAITMQFFFLAAFFWLNTMCFNI 420
            | ||.::         .||:.::..|.     .|... .|:....|..||.:|:|.|..|:.|.:
plant    42 C-LFKELRKFSFKLVFYLALSDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLWTTTIAFTL 105

  Fly   421 WWTFRDFRPSSLERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPETTLLRPGFGQ------LY 479
            ..|....: :.:| :.||    ::.||.||..|::|.:.:              ||.      .:
plant   106 HRTVVKHK-TDVE-DLEA----MFHLYVWGTSLVVTVIRS--------------FGNNHSHLGPW 150

  Fly   480 CWFDN--RNLSI-FAYFYGPI-GLLLCANIALF-----VSTTHQLTCGLWKR-DDVKSSSEKSAL 534
            ||...  :..:: |..||.|: |.:|......|     :....::..|:..| |...:.:|...|
plant   151 CWTQTGLKGKAVHFLTFYAPLWGAILYNGFTYFQVIRMLRNARRMAVGMSDRVDQFDNRAELKVL 215

  Fly   535 GRVCLKLVVVMGVTWIADILSWLVG----------GPHGVWFFTDL---INALQGVFIFIVVGCQ 586
            .|.....::::|        ||..|          ..|.:::.:.|   ..||.|:|..|..|..
plant   216 NRWGYYPLILIG--------SWAFGTINRIHDFIEPGHKIFWLSVLDVGTAALMGLFNSIAYGFN 272

  Fly   587 PQVWTACRRIFCPRL 601
            ..|    ||....||
plant   273 SSV----RRAIHERL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 68/315 (22%)
TM helix 1 327..352 CDD:410632 8/24 (33%)
TM helix 2 362..384 CDD:410632 7/30 (23%)
TM helix 3 396..423 CDD:410632 8/26 (31%)
TM helix 4 441..461 CDD:410632 6/19 (32%)
TM helix 5 485..515 CDD:410632 7/36 (19%)
TM helix 6 530..557 CDD:410632 5/26 (19%)
TM helix 7 562..587 CDD:410632 8/27 (30%)
GCR1NP_175261.1 7tm_GPCRs 26..272 CDD:475119 62/294 (21%)
TM helix 2 48..69 CDD:410628 3/20 (15%)
TM helix 3 81..103 CDD:410628 7/21 (33%)
TM helix 4 122..138 CDD:410628 6/15 (40%)
TM helix 6 205..237 CDD:410628 7/39 (18%)
TM helix 7 248..272 CDD:410628 7/23 (30%)

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