DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and adgre5b.3

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:675 Identity:135/675 - (20%)
Similarity:237/675 - (35%) Gaps:186/675 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 MSLAIEEMSPPPAA---PPRPSPPPTVKLNKCCHSGEYLNDGTCIAGSEALWLPMVYLVQQQRFF 95
            :.::.::..|.|.|   |.:.....::.:|.|    :.|||                        
Zfish   197 IEMSCDQFKPEPDAGNTPEKLKHLMSLLMNSC----KSLND------------------------ 233

  Fly    96 EPHGASPRFLKFLPNTRPTCRK--DQTTEIFRSRGANVMLFPNGTLYVRERALMVQPSDYCVDWE 158
             |||......|.|.|   .|..  |..:|...:.|..:.:|.:.   |.....::.|.       
Zfish   234 -PHGEHFTAEKLLEN---LCNSTDDLLSEGNVADGETLSVFLDA---VENSMRLIGPQ------- 284

  Fly   159 VAVVCLNDSQPINALEDPDYAANPLV--QQEPPKASLRLSKCCGKWGS--YNTQLQNCDLQPNHQ 219
                 |.|  |:..:|..:..|...|  .|.||..|:.||.     ||  :||..:..       
Zfish   285 -----LKD--PVTKMETQNTYAEVAVTRNQTPPSGSVTLST-----GSAHFNTSWETV------- 330

  Fly   220 AAVDGLLRLSPQLPEGSYQTSYGLPDCGQPGGY--SIAGDWQDA-------KLDRN--TAMLQLP 273
                    :....|..::.......|.......  |:|.:..|.       ||:..  ||::..|
Zfish   331 --------VGKSYPGFAFVALVSYKDMNSSSDLFNSMAREKSDVKEKQITYKLNSKVVTAVVSNP 387

  Fly   274 H-KNLSAG-QYCLEHTQREGEVKIIA-------------------------------CQHLFSSA 305
            . |:||.. .....|.::..|.:.:|                               |.||.|.|
Zfish   388 DTKHLSKPVTLIFTHEEKRAESEGVAYSCVYWSESERGWSGRGCELAWSNSTHTACSCSHLSSFA 452

  Fly   306 AGAGIHDGSIGGTIEQANGQNLQKAVLT--GGILVSIVFLSATLVAGFL--LPAVHHALHWRCQI 366
            ....::      .:|    ...:..|:|  |.:|..|..:...|...|.  :....:::|....:
Zfish   453 VLMALY------PVE----DTFELVVITRVGLVLSLICLILCILTFRFCRSIQGTRNSIHLHLSV 507

  Fly   367 C-YVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFLAAFFWLNTMCFNIWWTFRDFRPS 430
            | ::..|:|   |..|....:.:     ||..:|..:.||||:||.|:......:      :|..
Zfish   508 CLFIADLVF---LCGISSTHNQV-----ACAIVAGLLHFFFLSAFCWMLLEGVQL------YRMV 558

  Fly   431 SLERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPETTLLRPGFG-QLYCWFDNRNLSIFAYFY 494
            .|..:......|:|:: .:|.||:|..::|..  :|:      |:| ..:||.......|.::|.
Zfish   559 VLVFHTTLKHLYMYAV-GYGVPLVIVSISAIA--VPK------GYGTDRHCWLSLEGYLILSFFI 614

  Fly   495 GPIGLLLCANIALFVSTTHQLTCGLWKRDDVKSSSEK------SALGRVCLKLVVVMGVTWIADI 553
             |:.:::..||.:|:.|..:|.......:...|...|      :|:.::|     |:|.:|:...
Zfish   615 -PVCIIVILNITVFIITVWKLALKFSSLNPDLSKLHKIRSFLATAVAQLC-----VLGGSWVFGF 673

  Fly   554 LSWLVGGPHGVWFFTDLINALQGVFIFIVVGC--QPQVWTACRRIF---CPRLRHDITNTTNGVQ 613
            ..:...|...:.:...::|:|||..||| :.|  ..||....|.:|   |       :|...|..
Zfish   674 FLFQKNGTEVMLYLFIILNSLQGALIFI-MHCLLSKQVRVEYRSLFMRMC-------SNKKKGDY 730

  Fly   614 HSSSSQGLPSMAGGTEITQNTTTTT 638
            ..||::...|.....:|.|:|..:|
Zfish   731 SVSSTEPSHSSQKPLQIDQSTGEST 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 57/261 (22%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..105 CDD:214542
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639 5/49 (10%)
7tm_2 466..699 CDD:278432 57/261 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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