DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and adgre5b.3

DIOPT Version :10

Sequence 1:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:675 Identity:135/675 - (20%)
Similarity:237/675 - (35%) Gaps:186/675 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 MSLAIEEMSPPPAA---PPRPSPPPTVKLNKCCHSGEYLNDGTCIAGSEALWLPMVYLVQQQRFF 95
            :.::.::..|.|.|   |.:.....::.:|.|    :.|||                        
Zfish   197 IEMSCDQFKPEPDAGNTPEKLKHLMSLLMNSC----KSLND------------------------ 233

  Fly    96 EPHGASPRFLKFLPNTRPTCRK--DQTTEIFRSRGANVMLFPNGTLYVRERALMVQPSDYCVDWE 158
             |||......|.|.|   .|..  |..:|...:.|..:.:|.:.   |.....::.|.       
Zfish   234 -PHGEHFTAEKLLEN---LCNSTDDLLSEGNVADGETLSVFLDA---VENSMRLIGPQ------- 284

  Fly   159 VAVVCLNDSQPINALEDPDYAANPLV--QQEPPKASLRLSKCCGKWGS--YNTQLQNCDLQPNHQ 219
                 |.|  |:..:|..:..|...|  .|.||..|:.||.     ||  :||..:..       
Zfish   285 -----LKD--PVTKMETQNTYAEVAVTRNQTPPSGSVTLST-----GSAHFNTSWETV------- 330

  Fly   220 AAVDGLLRLSPQLPEGSYQTSYGLPDCGQPGGY--SIAGDWQDA-------KLDRN--TAMLQLP 273
                    :....|..::.......|.......  |:|.:..|.       ||:..  ||::..|
Zfish   331 --------VGKSYPGFAFVALVSYKDMNSSSDLFNSMAREKSDVKEKQITYKLNSKVVTAVVSNP 387

  Fly   274 H-KNLSAG-QYCLEHTQREGEVKIIA-------------------------------CQHLFSSA 305
            . |:||.. .....|.::..|.:.:|                               |.||.|.|
Zfish   388 DTKHLSKPVTLIFTHEEKRAESEGVAYSCVYWSESERGWSGRGCELAWSNSTHTACSCSHLSSFA 452

  Fly   306 AGAGIHDGSIGGTIEQANGQNLQKAVLT--GGILVSIVFLSATLVAGFL--LPAVHHALHWRCQI 366
            ....::      .:|    ...:..|:|  |.:|..|..:...|...|.  :....:::|....:
Zfish   453 VLMALY------PVE----DTFELVVITRVGLVLSLICLILCILTFRFCRSIQGTRNSIHLHLSV 507

  Fly   367 C-YVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFLAAFFWLNTMCFNIWWTFRDFRPS 430
            | ::..|:|   |..|....:.:     ||..:|..:.||||:||.|:......:      :|..
Zfish   508 CLFIADLVF---LCGISSTHNQV-----ACAIVAGLLHFFFLSAFCWMLLEGVQL------YRMV 558

  Fly   431 SLERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPETTLLRPGFG-QLYCWFDNRNLSIFAYFY 494
            .|..:......|:|:: .:|.||:|..::|..  :|:      |:| ..:||.......|.::|.
Zfish   559 VLVFHTTLKHLYMYAV-GYGVPLVIVSISAIA--VPK------GYGTDRHCWLSLEGYLILSFFI 614

  Fly   495 GPIGLLLCANIALFVSTTHQLTCGLWKRDDVKSSSEK------SALGRVCLKLVVVMGVTWIADI 553
             |:.:::..||.:|:.|..:|.......:...|...|      :|:.::|     |:|.:|:...
Zfish   615 -PVCIIVILNITVFIITVWKLALKFSSLNPDLSKLHKIRSFLATAVAQLC-----VLGGSWVFGF 673

  Fly   554 LSWLVGGPHGVWFFTDLINALQGVFIFIVVGC--QPQVWTACRRIF---CPRLRHDITNTTNGVQ 613
            ..:...|...:.:...::|:|||..||| :.|  ..||....|.:|   |       :|...|..
Zfish   674 FLFQKNGTEVMLYLFIILNSLQGALIFI-MHCLLSKQVRVEYRSLFMRMC-------SNKKKGDY 730

  Fly   614 HSSSSQGLPSMAGGTEITQNTTTTT 638
            ..||::...|.....:|.|:|..:|
Zfish   731 SVSSTEPSHSSQKPLQIDQSTGEST 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 65/288 (23%)
TM helix 1 327..352 CDD:410632 6/26 (23%)
TM helix 2 362..384 CDD:410632 5/22 (23%)
TM helix 3 396..423 CDD:410632 8/26 (31%)
TM helix 4 441..461 CDD:410632 6/19 (32%)
TM helix 5 485..515 CDD:410632 7/29 (24%)
TM helix 6 530..557 CDD:410632 6/32 (19%)
TM helix 7 562..587 CDD:410632 8/26 (31%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..103 CDD:429571
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639 5/49 (10%)
7tm_GPCRs 463..723 CDD:475119 66/296 (22%)
TM helix 1 466..490 CDD:410628 6/23 (26%)
TM helix 2 499..520 CDD:410628 5/23 (22%)
TM helix 3 530..552 CDD:410628 8/21 (38%)
TM helix 4 570..586 CDD:410628 6/16 (38%)
TM helix 5 605..628 CDD:410628 5/23 (22%)
TM helix 6 655..677 CDD:410628 5/26 (19%)
TM helix 7 682..707 CDD:410628 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.

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