DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl1 and Adgrf4

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001276428.1 Gene:Adgrf4 / 78249 MGIID:1925499 Length:698 Species:Mus musculus


Alignment Length:497 Identity:107/497 - (21%)
Similarity:167/497 - (33%) Gaps:156/497 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 ERALMVQPSDYCVDWEVAVVCLNDSQPINALEDPDYAANPLVQQEPPKASLRLSKCCGKWGSYNT 207
            |.:|.:....|....:|.||.   ..|..||::..:.|:..:....|.....|.:.    ...||
Mouse   257 EHSLSLSVPRYNATEDVLVVI---EIPRQALQELSFNASQAIVVAFPTLGAILKEV----HRPNT 314

  Fly   208 QLQNCDLQPNHQAAVDGLLRLSPQLPEG-------------SYQTSYGLPDCGQPGGYSIAGDWQ 259
            .||.         .:|.|: ||..||||             |..||            |....|.
Mouse   315 NLQK---------PIDDLI-LSLVLPEGLNEIILTFDKINKSQSTS------------SQCVSWD 357

  Fly   260 DAKLDRNTAMLQLPHKNLSAGQY----CLEHTQREGEVKIIACQHLFSSAAGAGIHDGSIGGTIE 320
            .|                 .||:    |...:.....|| ..|:|                    
Mouse   358 PA-----------------TGQWDESPCTVMSDINSTVK-CRCRH-------------------- 384

  Fly   321 QANGQNLQKAVLTGGILVS-----------IVFLSATL-VAGFLLPAVHHALHWR---------- 363
                   .|||.:..||:|           |.|:..:: :...:|..|..|:.|.          
Mouse   385 -------TKAVTSFSILMSSKPVKNTILNHITFIGLSISIFSLVLCLVIEAIVWSRVVVTEISYM 442

  Fly   364 ---CQICYVTCLLFGKILLAI-EELSSSLQPGSAACHTLAITMQFFFLAAFFWL----NTMCFNI 420
               |.:.....||...:...| ...|:::|.....|..:.....||||:.|||:    ..:.:.|
Mouse   443 RHVCIVNIAVSLLTANVWFIIGSNFSANVQEDHKWCVAVTFLCHFFFLSLFFWMLFKALLIVYGI 507

  Fly   421 WWTFRDFRPSSLERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPETTLLRPGFGQL---YCWF 482
            ...||....|.:.....|:        .:|.||:|..:.        .|:..||.|..   .||.
Mouse   508 LVVFRRMMKSRMMAIGFAI--------GYGCPLVIAVIT--------VTVTEPGEGYTRKDACWL 556

  Fly   483 D-NRNLSIFAYFYGPIGLL---LCANIALFVSTTHQLTCGLWKRDD---VKSSSEKSALGRVCLK 540
            : |:..::||:....:.::   |...:|:.::|...| .|..|..|   |...|:..|:      
Mouse   557 NWNQTKALFAFAIPALAIVAVNLLVVLAVAINTQRPL-IGSSKSQDMAIVFRISKNVAI------ 614

  Fly   541 LVVVMGVTWIADILSWLVGGPHGVW-FFTDLINALQGVFIFI 581
            |..::|:|| ...|:.|:.|.|.|: ....|:||.||.||.:
Mouse   615 LTPLLGLTW-GFGLTTLLEGVHLVFHIIFALLNAFQGFFILL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 68/290 (23%)
Adgrf4NP_001276428.1 GPS 351..394 CDD:366827 13/87 (15%)
7tm_GPCRs 402..669 CDD:391938 64/278 (23%)
TM helix 1 405..429 CDD:341315 4/23 (17%)
TM helix 2 444..465 CDD:341315 4/20 (20%)
TM helix 3 479..501 CDD:341315 7/21 (33%)
TM helix 4 522..538 CDD:341315 5/23 (22%)
TM helix 5 560..583 CDD:341315 3/22 (14%)
TM helix 6 606..631 CDD:341315 7/31 (23%)
TM helix 7 636..661 CDD:341315 8/20 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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