DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and Adgrd1

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_001070157.3 Gene:Adgrd1 / 689257 RGDID:1594795 Length:903 Species:Rattus norvegicus


Alignment Length:714 Identity:150/714 - (21%)
Similarity:257/714 - (35%) Gaps:225/714 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PPRPSPPPTVKLNKCCHSGEYLNDGTCIAGSEALWLPMVYLVQQQRFFEPHGASPRFLK----FL 108
            ||..|.||.:   ...|.         :..::|....:..|.::::.|:......|:|:    .|
  Rat   284 PPLSSTPPAM---PTAHP---------VMPTDAYHPIITNLTEERKHFQRPRTVLRYLQNVSLSL 336

  Fly   109 PNTRPTCRKDQT----TEIFRSRGANVMLFP--------------------------NGTLYVRE 143
            ||   ....::|    ||.|......|:|.|                          :..|..||
  Rat   337 PN---KSLSEETALNLTETFLRTVGEVLLLPSWIHVSEDNAVTLGLVDTIDTVMGHISSNLQPRE 398

  Fly   144 RALMVQPSDYCVDWEVAVVCLNDSQPINALEDPDY--AANPLVQQEPPKASLRLSKCCGKWGS-- 204
            ..:.:..|....::.||.|.    .|  ||..|.|  .|:.....|.|:.:|...    .|.:  
  Rat   399 PHISLTGSSSMAEFSVAKVL----PP--ALSAPHYRFPAHGHSYIEIPREALHSQ----AWTTIV 453

  Fly   205 ---YNTQ---LQNCDLQPNHQAAVDGLLRLSPQLPEGSYQTSYGLPDCGQPGGYSIAGDWQDAKL 263
               |:|.   |.|  :.|           .|.::||                    |.:.:|..|
  Rat   454 GLLYHTMHYYLNN--IPP-----------ASTEIPE--------------------AANCRDCLL 485

  Fly   264 DRNTAMLQLP-------HKNLSAGQYCLEH-----TQR-------EGEVKIIACQHL-FS----- 303
            ...:.::.|.       .:|||.......|     ||:       |.....:.|..| ||     
  Rat   486 SVASHLISLEVSPPPTLSQNLSGSPLITVHLRHKLTQKQYVDATNESNRLFLYCAFLNFSSGEGV 550

  Fly   304 -SAAGAGIHDGSIGGTI----EQANGQNLQKAV---LT------------GGILVSIVFLSATLV 348
             |:.|..:.:|::..::    ...|...|.:.|   ||            .|..:|::.|:||||
  Rat   551 WSSQGCALTEGNLTYSVCHCTHLTNFAILMQVVPLKLTLGHQVALSSISYVGCSLSVLCLAATLV 615

  Fly   349 AGFLLPAV----HHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFLAA 409
            ...:|.:|    :...|....:.:  .:|..::||.|   |.|::||:..|..||:.:.:|||.|
  Rat   616 TFAVLSSVSTIRNQRYHIHANLSF--AVLVAQVLLLI---SFSMEPGTVPCQVLAVLLHYFFLTA 675

  Fly   410 FFW-------LNTMCFNIWWTFRDFRPSSLERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPE 467
            |.|       |.:|...::            .::::...|.|.: .||.||||..::.      .
  Rat   676 FAWMLVEGLHLYSMVIKVF------------GSEDSKHLYYYGI-GWGCPLLICIISV------S 721

  Fly   468 TTLLRPGFGQLYCWFDNRNLSIFAYFYGPIGLLLCANIALFVSTT----HQLTCGLWKRDDVKSS 528
            :::...|.|. .||....:.:|:| |.||..|::..||.:.|:.|    |..|      |..|..
  Rat   722 SSMDSYGTGD-SCWLSVESGAIWA-FVGPALLVIVVNIVILVAVTRVISHIST------DSYKIH 778

  Fly   529 SEKSAL---GRVCLKLVVVMGVTWIADILSWLVGGPHGVW-FFTDLINALQGVFIFIVVGCQPQV 589
            .:.||.   .:....|:.::|.:|:..:|:  |.....|: :...::|:.||:|||         
  Rat   779 GDPSAFKLTAKAVAVLLPILGTSWVFGVLA--VSDRALVFQYMFAILNSSQGLFIF--------- 832

  Fly   590 WTACRRIFCPRLRHDITNT--TNGVQHSSSSQGLPSMAGGTEITQNTTTTT---TTTNTTATHM 648
                       |.|.:.|:  ....:|......|.|.:..|..|:.:::.|   |...|.:|.:
  Rat   833 -----------LFHCLLNSEVRAAFKHKMKVWSLTSSSAHTANTKPSSSDTVNGTRPGTASTKL 885

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 69/283 (24%)
Adgrd1XP_001070157.3 LamG <173..273 CDD:304605
GPS 539..579 CDD:280071 8/39 (21%)
7tm_4 595..831 CDD:304433 66/269 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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