DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and Adgrl4

DIOPT Version :10

Sequence 1:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_071630.1 Gene:Adgrl4 / 64124 RGDID:621136 Length:738 Species:Rattus norvegicus


Alignment Length:297 Identity:68/297 - (22%)
Similarity:122/297 - (41%) Gaps:50/297 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 CQH------LFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLSATLVAGFL---L 353
            |.|      |.|.:....:.|.:|...|.|.            ||::|::.|:..:...:.   :
  Rat   451 CSHLTHFAILMSPSTSIEVKDYNILTRITQL------------GIIISLICLAICIFTFWFFSEI 503

  Fly   354 PAVHHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFLAAFFWLNTMCF 418
            .:....:|  ..:|   |.||...|:.:  :..::......|..:|..:.:||||||.|   ||.
  Rat   504 QSTRTTIH--KNLC---CSLFLAQLVFL--VGININTNKLVCSIIAGLLHYFFLAAFAW---MCI 558

  Fly   419 NIWWTFRDFRPSSLERNQEALRRYLYSLYAWGGP-LLITFVAACVDQLPETTLLRPGFGQLYCWF 482
            ...:.:  .....|..|:..|.:..| ::.:..| :::.|.|:...:...||.:        ||.
  Rat   559 EGIYLY--LIVVGLIYNKGFLHKNFY-IFGYLSPAVVVGFSASLGYRYYGTTKV--------CWL 612

  Fly   483 DNRNLSIFAYFYGPIGLLLCANIALF---VSTTHQLTCGLWKRDDVKSSSEKSALGRVCLKLVVV 544
            ...|..|:: |.||..|::..|:..|   :....:.|.||  :.:|.......:..|..|.|:.:
  Rat   613 STENNFIWS-FIGPACLIILVNLLAFGVIIYKVFRHTAGL--KPEVSCYENIRSCARGALALLFL 674

  Fly   545 MGVTWIADILSWLVGGPHGVWFFTDLINALQGVFIFI 581
            :|.||...:|..:.......:.|| :.||.||:|||:
  Rat   675 LGTTWTFGVLHVVHASVVTAYLFT-VSNAFQGMFIFL 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 60/263 (23%)
TM helix 1 327..352 CDD:410632 4/24 (17%)
TM helix 2 362..384 CDD:410632 5/21 (24%)
TM helix 3 396..423 CDD:410632 10/26 (38%)
TM helix 4 441..461 CDD:410632 4/20 (20%)
TM helix 5 485..515 CDD:410632 8/32 (25%)
TM helix 6 530..557 CDD:410632 7/26 (27%)
TM helix 7 562..587 CDD:410632 9/20 (45%)
Adgrl4NP_071630.1 EGF_CA 57..90 CDD:214542
EGF_CA 107..140 CDD:214542
GAIN 186..361 CDD:465137
GPS 416..460 CDD:460350 2/8 (25%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 417..467 4/15 (27%)
7tmB2_ETL 472..729 CDD:320553 63/276 (23%)
TM helix 1 474..499 CDD:320553 7/36 (19%)
TM helix 2 508..530 CDD:320553 6/28 (21%)
TM helix 3 539..566 CDD:320553 10/31 (32%)
TM helix 4 578..598 CDD:320553 3/20 (15%)
TM helix 5 615..644 CDD:320553 8/29 (28%)
TM helix 6 660..687 CDD:320553 7/26 (27%)
TM helix 7 691..716 CDD:320553 9/21 (43%)
Blue background indicates that the domain is not in the aligned region.

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