DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and adgrd2

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_021334184.1 Gene:adgrd2 / 571770 ZFINID:ZDB-GENE-081104-190 Length:1145 Species:Danio rerio


Alignment Length:530 Identity:115/530 - (21%)
Similarity:184/530 - (34%) Gaps:163/530 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 VAVVCLNDSQPINALEDPDYAANPLVQQEPPKASLRLSKCCGKWGSYNTQLQNCDLQPNHQAAVD 223
            ::...|.|.||::.      |.:..:|......|::....|..|        :.||..      |
Zfish   703 ISSTVLADEQPVSV------AIHFTLQHRLQNTSVKFIPVCAFW--------DFDLMS------D 747

  Fly   224 GLLRLSPQLPEGSYQTSYGLPDCGQPGGYSIAGDWQDAKLDRNTAMLQLPHKNLSAGQYCLEHTQ 288
            |                         ||:|..|            .:.:..:|.|...||...|.
Zfish   748 G-------------------------GGWSTKG------------CVVISTQNNSTSCYCNHTTN 775

  Fly   289 REGEVKIIACQHLFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLSATLVAGFLL 353
            ....::|...|.       ..:||.            .||...|.|    |.|.|.| |:..|:|
Zfish   776 FALLLQIYEVQR-------DAVHDA------------GLQILSLIG----SAVSLCA-LIFTFIL 816

  Fly   354 -----------PAVHHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFL 407
                       ..||..|        :..|:..:.||.:.:.::..|   .||..:...:..|||
Zfish   817 FVAVGVPKSDRTTVHKNL--------MAALIVAQFLLILSDWAAGSQ---EACWLVTALLHLFFL 870

  Fly   408 AAFFWLNTMCFNIWWTFRDFRPSSLERNQEALRRYLYSLYAWGGPLLITFV--AACVDQLPETTL 470
            ::|.|:......:|........|      |..|..:|.:..||.|::|..|  .|.:||..    
Zfish   871 SSFCWMLVEGLLLWSKVVSVNIS------EDRRMKMYYVLGWGLPVVIVAVTLVATLDQYK---- 925

  Fly   471 LRPGFGQLYCWFDNRNLSIFAYFYGPIGLLLCAN-IALF------VSTTHQLTCGLWKRDDVK-- 526
                 .|.:||.:.::..|:| |.||:..:|..| :.||      ||:..:....|....|.|  
Zfish   926 -----AQQHCWLNLQSSVIWA-FAGPVLFVLAVNAVVLFRVVLVTVSSARRRAKMLTPSSDSKLH 984

  Fly   527 SSSEKSALGRVCLKLVVVMGVTW-------IADILSWLVGGPHGVWFFTDLINALQGVFIFIVVG 584
            :.....|..|..|.|:.|:|:||       ::|::::|        |.|  :||.||::||:|..
Zfish   985 TLDLTWAATRPVLILLPVLGLTWLCGVLVHLSDVMAYL--------FIT--LNAFQGLYIFLVYA 1039

  Fly   585 C-QPQVWTACRRIFCPRLRHDITNTTNGVQHSSSSQGLPSMAGGTEITQNTTTTTTTTNTTATHM 648
            . ..:|..|.|||...|.....||.:..:..      |||         ..:...:..::..||.
Zfish  1040 VYNSEVRNAIRRIQEKRKALSFTNCSQPISF------LPS---------QKSPRASWVHSLQTHS 1089

  Fly   649 PSNPAEDEVP 658
            ..:.:|...|
Zfish  1090 SRDSSESSTP 1099

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 69/278 (25%)
adgrd2XP_021334184.1 LamG 204..402 CDD:328935
GPS 735..779 CDD:307782 15/94 (16%)
7tmB2_GPR144 792..1054 CDD:320383 80/315 (25%)
TM helix 1 794..819 CDD:320383 11/29 (38%)
TM helix 2 828..850 CDD:320383 6/29 (21%)
TM helix 3 859..886 CDD:320383 6/26 (23%)
TM helix 4 898..918 CDD:320383 6/19 (32%)
TM helix 5 935..964 CDD:320383 9/29 (31%)
TM helix 6 988..1015 CDD:320383 8/26 (31%)
TM helix 7 1017..1042 CDD:320383 11/34 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X7362
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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