DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and Adgrf4

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_006244702.1 Gene:Adgrf4 / 501106 RGDID:1565216 Length:698 Species:Rattus norvegicus


Alignment Length:412 Identity:90/412 - (21%)
Similarity:146/412 - (35%) Gaps:112/412 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 QPNH--QAAVDGLLRLSPQLPEGSYQTSYGLPDCGQPGGYSIAGDWQDAKLDRNTAMLQLPHKNL 277
            |||.  |..::.|: ||..||||                           |:.........:|:.
  Rat   311 QPNSSLQKPINDLI-LSLVLPEG---------------------------LNEIILTFDKINKSQ 347

  Fly   278 SAGQYCLEHTQREGEVKIIACQHLFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVS--- 339
            |....|:.....|.:.....|..:           ..|..|::.....|  |||::..||:|   
  Rat   348 STSSQCVSWDAEERQWDESPCTVM-----------SDINSTVKCRCRHN--KAVMSFSILMSSKP 399

  Fly   340 --------IVFLSATL-VAGFLLPAVHHALHWR-------------CQICYVTCLLFGKILLAI- 381
                    |.|:..:: :...:|..|..|:.|.             |.:.....||...:...| 
  Rat   400 VKDMILNRITFIGLSVSIFSLVLCLVIEAIVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIG 464

  Fly   382 EELSSSLQPGSAACHTLAITMQFFFLAAFFWL----NTMCFNIWWTFRDFRPSSLERNQEALRRY 442
            ...|::.|.....|..:.....||||:.|||:    ..:.:.|...||....|.:.....|:   
  Rat   465 SNFSANAQEDHKWCVAVTFFCHFFFLSLFFWMLFKALLIVYGILVVFRRMMKSRMMAIGFAI--- 526

  Fly   443 LYSLYAWGGPLLITFVAACVDQLPETTLLRPGFGQL---YCWFD-NRNLSIFAYFYG-----PIG 498
                 .:|.||:|..:...|.:        ||.|..   .||.: |:..::||:...     .:.
  Rat   527 -----GYGCPLVIAVITVSVTE--------PGEGYTRRDACWLNWNQTKALFAFAIPALAIVAVN 578

  Fly   499 LLLCANIALFVSTTHQLTCGLWKRDD---VKSSSEKSALGRVCLKLVVVMGVTWIADILSWLVGG 560
            ||:...:|:   .|.:...|..|..|   |...|:..|:      |..::|:|| ...|:.|:.|
  Rat   579 LLVVLTVAI---NTQRPLIGSSKSQDMAIVFRISKNVAI------LTPLLGLTW-GFGLTTLLEG 633

  Fly   561 PHGVW-FFTDLINALQGVFIFI 581
            .|.|: ....|:||.||:||.:
  Rat   634 THLVFHIIFALLNAFQGLFILL 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 68/292 (23%)
Adgrf4XP_006244702.1 GPS 351..394 CDD:280071 9/55 (16%)
7tm_4 408..653 CDD:304433 62/270 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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