DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl1 and CG15556

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster


Alignment Length:574 Identity:121/574 - (21%)
Similarity:192/574 - (33%) Gaps:177/574 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ALWLPMVYLVQQQRFFEPHGASPRFLKFLPNTRPTCRKDQTTEIFRSRGANVMLFPNGTLYVRER 144
            |:::|.....|.:|    .|||  :|.|...||.:...:...||.|...:||:            
  Fly   320 AVFIPEKLWTQLKR----KGAS--YLVFKVYTRDSLFVETEEEIKRRPTSNVI------------ 366

  Fly   145 ALMVQPSDYCVDWEVAVVCLNDSQPINALEDPDYAANPLVQQEPPKASLRLSKCCGKWGSYNTQL 209
                         .:.:..|||::....|  |.:..|....:      .:....||.| :|.|.|
  Fly   367 -------------SITIPGLNDTKLPGKL--PFFLRNAKANE------TQFEGGCGYW-NYETWL 409

  Fly   210 QNCDLQPNHQAAVDGLLRLSPQLPEGSYQTSYGLPDCGQPGGYSIAGDWQDAKLDRNTAMLQLPH 274
            .            ||:            .||         ||.|                     
  Fly   410 S------------DGI------------STS---------GGGS--------------------- 420

  Fly   275 KNLSAGQYCLEHTQREGEVKIIAC--QHL--FSSAAG-----AGIHDGSIGGTIEQANGQNLQKA 330
              |.|..:           .:|.|  .||  |:...|     ||:.......:::......|..:
  Fly   421 --LEASSH-----------PVILCHADHLTQFTFLLGVSKMQAGLDTNEDDHSLDVITNVGLTLS 472

  Fly   331 VLTGGILVSIVFLSATLVAGFLLPAVHHALHWRCQICYVTCLLFGKILLAIEELSSSL-QPGSAA 394
            :|  |:|  ::|::|.:...|...|....|...|....:..|.|  ::|:...|...| |..|..
  Fly   473 LL--GLL--MIFITAAVFKSFRTLASTKILLNLCAALGLQLLFF--LILSQSHLLEQLEQSESER 531

  Fly   395 CHTLAITMQFFFLAAFFWLNTMCFNIWWTFRDFRPSSLERNQEAL-----RRYLY--SLYAWGGP 452
            |..:...||:..|..|.|:..:.|           ...:|....:     |.|:.  ::.||..|
  Fly   532 CTLVGAVMQYLLLVVFSWMFIIGF-----------LQYQRYVRVIGVNHPRHYILMSAVAAWTLP 585

  Fly   453 LLITFVAACVDQLPETTLLRPGFGQ---------LYCWFDNRNLSIFAYFYGPIGLLLCANIALF 508
            |:.|.:         ...|.||..:         :.|:.....||:....  ||||:..||..|.
  Fly   586 LIPTLL---------VVFLEPGSYRPNNSSMDYPILCYPSGYGLSLGVIL--PIGLITVANAILV 639

  Fly   509 VSTTHQLTCGLWKRDDVKSSSEKSALGRVCLKLVVVMGVTWIADILSWLVGGPHGVWFFTDLINA 573
            ...:..:...|:|||.:...     ||...| |..::|:|||..:.::...|....:.|. |...
  Fly   640 GYISWSVYTALFKRDLIFKQ-----LGLFVL-LFFLLGITWIFGLCTYFDFGRIFAYLFC-LTAT 697

  Fly   574 LQGVFI---FIVVGCQPQ-VWTA-CRRIFCPRLRHDITNTTN----GVQHSSSS 618
            |||..:   |||...:.| .|.. |......|.:..|...|:    |:.|||::
  Fly   698 LQGFVLFLYFIVFNKENQRAWLGLCCNSSKKRNQQTIQMPTDSILQGLSHSSTN 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 62/266 (23%)
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 58/252 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462178
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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