DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and Adgrg3

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_038954076.1 Gene:Adgrg3 / 291854 RGDID:1305674 Length:574 Species:Rattus norvegicus


Alignment Length:324 Identity:82/324 - (25%)
Similarity:128/324 - (39%) Gaps:89/324 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   295 IIACQHLFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLSATLVA----GFLL-- 353
            :..|.||...|.       .:..|::||..:.|.: :...|..||::||:.|:|.    .|.|  
  Rat   270 VCRCDHLTFFAL-------LLRPTLDQATARTLTR-ISQAGSAVSMIFLAFTMVLYVAFRFSLQR 326

  Fly   354 ------PAVHHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFLAAFFW 412
                  |.:|.||.....:..:|.|:         .:.|..|...|:|...|....:|.|..|.|
  Rat   327 FKSEDAPKIHMALSTSLFLLNLTFLI---------NVGSGSQGPPASCWVRAAIFHYFLLCVFTW 382

  Fly   413 LNTMCFNIWW----TFRDFRPSSLERNQEALRRYL--YSLYAWGGPLLITF---------VAACV 462
            :....|:::.    .|..:           ...|.  .||..||.|:||..         |....
  Rat   383 MGLEAFHLYLLVIKVFNTY-----------FGHYFLKLSLLGWGLPVLIVIGVGSSNSYGVYTIR 436

  Fly   463 DQLPETTLLRPGFGQLYCWFDNRNLSIFAYFYG------PIGLLLCANIALFVSTTHQLTCG--- 518
            ||...|:|      :| ||| .:..:::|..:|      ..|.::.|.:|..:.|...:|.|   
  Rat   437 DQENRTSL------EL-CWF-QKEPALYATVHGYFLVTFLFGAVVLAMVAWKIFTLPSVTAGKGQ 493

  Fly   519 --LWKRDDVKSSSEKSALGRVCLKLVVVMGVTWIADILSWLVGGPHGVWFFTDLINALQGVFIF 580
              .||       |..:.||     |..::|:||...:|:.|  |...|:.|| |:|:|||:|||
  Rat   494 GQTWK-------SVLTVLG-----LSSLVGMTWGLAVLTPL--GLSTVYIFT-LLNSLQGLFIF 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 71/287 (25%)
Adgrg3XP_038954076.1 GPS 244..282 CDD:396408 4/18 (22%)
7tm_GPCRs 292..551 CDD:421689 75/295 (25%)
TM helix 1 294..319 CDD:410628 8/25 (32%)
TM helix 2 333..355 CDD:410628 6/30 (20%)
TM helix 3 366..393 CDD:410628 6/26 (23%)
TM helix 4 406..426 CDD:410628 7/19 (37%)
TM helix 5 454..481 CDD:410628 5/26 (19%)
TM helix 6 495..522 CDD:410628 10/38 (26%)
TM helix 7 524..549 CDD:410628 11/20 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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