DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl1 and mthl11

DIOPT Version :10

Sequence 1:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:NP_731479.3 Gene:mthl11 / 117467 FlyBaseID:FBgn0045443 Length:532 Species:Drosophila melanogaster


Alignment Length:525 Identity:113/525 - (21%)
Similarity:191/525 - (36%) Gaps:134/525 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 GSYNTQLQNCDLQPNHQAAVDGLLRLSPQLPEGSYQTSYGLPDCGQPGGYSIAGDWQDAKLDRNT 267
            |..:..:.|||.....|      ||.|.:|..|||:....:......|.|       |.::|.:.
  Fly    17 GVRSRDIPNCDFFDTVQ------LRESEKLCNGSYRYEDVVIPAKLTGKY-------DYEIDYDG 68

  Fly   268 AMLQLP-------------------HKNLSAG-------------QYCLEHTQREGEV------- 293
            ..:.:|                   ||.|.||             :|.|:.||..|.|       
  Fly    69 DRVSVPKHIRGCVCKLKTCIRFCCHHKKLMAGNLCSQDVYENLTYEYTLDITQLNGSVIKKHVLN 133

  Fly   294 -------KIIACQHLFSSAAGAGIHD-------GSIGGTIEQ---------------ANGQN--- 326
                   ..:.|:..:|..|....:|       ||:....:|               :.|:|   
  Fly   134 DMVVQQDLPLPCERHYSLDAETSTYDMWSLYENGSLFRHFDQRYLSKQEFCLQPNPTSTGKNYSL 198

  Fly   327 ---------------------LQKAVLTGG---ILVSIVFLSATLVAGFLLPAVHHALHWRCQIC 367
                                 ::|:.|:..   :..|.||.....:|.:|......:||.:|...
  Fly   199 IVAFNCIQKPSMKMAYGRFECVRKSRLSNASIPVKFSSVFFMVITIAAYLWLPKFRSLHGKCCNL 263

  Fly   368 YVTCLLFGKILLAIEELSSSLQPGSAACHTLAITMQFFFLAAFFWLNTMCFNIWWTFRDFRPSSL 432
            |..||.. ..||.:..|....:..:..|:.......|..:|.|.||:.:.|::|..|...:....
  Fly   264 YFICLAI-TFLLNVISLFGIFELKTPICYLTGYAGYFTVMATFLWLSVISFDVWRRFAMRKFQVF 327

  Fly   433 ERNQEALRRYLYSLYAWGGPLLITFVAACVDQLPETTL---LRPGFGQLYCWFDNRNLSIFAYFY 494
            .:|:.: ..:.|::..|....|:|.:...|||..||.|   ..|..|...||......|...|||
  Fly   328 YKNKRS-SFFNYNIIVWSSAGLLTCIIFLVDQFVETNLDNPYNPAVGVFSCWIFTNGWSATFYFY 391

  Fly   495 GPIGLLLCANIALFVSTTHQLTCGLWKRDDVKSSSEKSALG------RVCLKLVVVMGVTWIADI 553
            .|:.:|:..|.|.|..||..:.....:...|.::||...|.      |:..:|.::||.:|..:|
  Fly   392 APLAILIILNCASFFLTTRYIYVENKQNQKVLNNSEPQKLSRNHANYRIYFRLFIIMGGSWFLEI 456

  Fly   554 LSWLVGGPHGVW----FFTDLINALQGVFIFIVVGCQPQVWTACRRIFCPRLRH------DITNT 608
            ::::. ....:|    ...|.||..||:.||:...|..:::...|:    |:::      ::|||
  Fly   457 IAFIC-EMENMWKPLIILNDYINCSQGIIIFVATFCNHEMFRLIRK----RIQNRNITSLELTNT 516

  Fly   609 TNGVQ 613
            :..|:
  Fly   517 SRPVE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 72/311 (23%)
TM helix 1 327..352 CDD:410632 6/27 (22%)
TM helix 2 362..384 CDD:410632 6/21 (29%)
TM helix 3 396..423 CDD:410632 7/26 (27%)
TM helix 4 441..461 CDD:410632 4/19 (21%)
TM helix 5 485..515 CDD:410632 11/29 (38%)
TM helix 6 530..557 CDD:410632 8/32 (25%)
TM helix 7 562..587 CDD:410632 9/28 (32%)
mthl11NP_731479.3 Methuselah_N 26..204 CDD:429053 35/190 (18%)
7tmB3_Methuselah-like 236..504 CDD:410632 69/274 (25%)
TM helix 2 258..280 CDD:410632 6/22 (27%)
TM helix 3 291..318 CDD:410632 7/26 (27%)
TM helix 4 335..355 CDD:410632 4/19 (21%)
TM helix 5 383..412 CDD:410632 11/28 (39%)
TM helix 6 433..460 CDD:410632 6/26 (23%)
TM helix 7 468..493 CDD:410632 8/24 (33%)

Return to query results.
Submit another query.