DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl1 and LOC110439897

DIOPT Version :9

Sequence 1:NP_001285340.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_021333226.1 Gene:LOC110439897 / 110439897 -ID:- Length:111 Species:Danio rerio


Alignment Length:70 Identity:20/70 - (28%)
Similarity:32/70 - (45%) Gaps:9/70 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   454 LITFVAACVD--QLPETTLLRPGFGQLYCWFDNRNLSIFAYFYGPIGLLLCANIALFVSTTHQLT 516
            ::..|..||.  .:||      |:|..:||.......|:: |.||:.::|..|:.||:.....|.
Zfish    37 VLAMVVVCVSIGLVPE------GYGSEHCWIKYDKGFIWS-FLGPVCVILALNLILFIRIVIYLN 94

  Fly   517 CGLWK 521
            ..|.|
Zfish    95 SALSK 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_001285340.1 7tm_4 329..579 CDD:304433 20/70 (29%)
LOC110439897XP_021333226.1 7tm_GPCRs <1..>111 CDD:333717 20/70 (29%)
TM helix 4 30..46 CDD:320095 2/8 (25%)
TM helix 5 64..87 CDD:320095 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1153592at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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