DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl1 and adgrf3a

DIOPT Version :10

Sequence 1:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster
Sequence 2:XP_021322955.3 Gene:adgrf3a / 101886922 ZFINID:ZDB-GENE-131121-607 Length:997 Species:Danio rerio


Alignment Length:585 Identity:128/585 - (21%)
Similarity:206/585 - (35%) Gaps:136/585 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 KDQTTEIFR----SRGANVMLFPNGTLYVRERALMVQPSDYCV----DWEVAVVCLNDSQPINAL 173
            ||...::|:    |.......|||....|....:|   :|...    .|...|:....|...|.|
Zfish   462 KDNADQLFQRINDSTTLRTFTFPNIETSVNIFGVM---NDVSTRQQNQWNDTVMSKLVSSASNLL 523

  Fly   174 EDPDYAANP-----------------------LVQQEPPKASLRLSKCCGKWG------SYNTQL 209
            .||....||                       |:...|..:|......|....      ::|..:
Zfish   524 NDPSGWQNPENKSIFISVEYLKTIERMMNNSNLISNTPYISSNAQMALCNHTSPADICKTFNASV 588

  Fly   210 QNCDLQPNHQAAVDGLLRLSPQLP--EGSYQTSYGL---PDCGQPGGYSIAGDWQDAKLDRNTAM 269
            :|.|    :...|.|...|...||  ||:...:..|   |........||.       |:.::|.
Zfish   589 RNSD----NSVVVFGFRNLYQILPKAEGNDSNTTILSVTPVNANNTNRSIT-------LEFDSAK 642

  Fly   270 LQLPHKNLSAGQYCLEHTQREGEVKIIACQHLFSSAAGAGIHDGSIGGTIEQA-NGQNL--QKAV 331
            .:||:..:    ||:...:...|.....|:..........|.|.:...||..: |.:.|  ...:
Zfish   643 QRLPNHMI----YCVYWDENLNEWSSDGCRWAGVDNPTLCICDHNSAFTILMSKNAETLPYMDEL 703

  Fly   332 LTGGILVSIVFLSATLVAGFLL-PAV--------HHALHWRCQICYVTCLLFGKILLAIEELSSS 387
            ...|:.:||:.|.|.|:...|: .||        .|...:...:    |||....:........|
Zfish   704 TYAGLGISILSLLACLIIKVLVWDAVVKSPISNFRHVALFNISL----CLLLAHCMFLTTSKPES 764

  Fly   388 LQPGSAACHTLAITMQFFFLAAFFWLNTMCF----NIWWTFRDFRPSSLERNQEALRRYLYSLYA 448
            :.|.  .|..|.:...|||||.|||:..:.|    .:.:.|            :.||:.::.   
Zfish   765 IPPN--WCSILTLIKHFFFLAVFFWMLCLSFVLLHQMIYVF------------DRLRKKVFL--- 812

  Fly   449 WGGPLLITFVAACVDQLPETTLL---RPGFGQLY----CWFDNRNL---SIFAYFYGPIGLLLCA 503
               .|.||...||.......|.:   ....|:.|    ||...:..   ||||:.. |||.::..
Zfish   813 ---GLSITVGYACPIIAVAVTYISFNNGAEGEYYSKSTCWLTYKGTLKGSIFAFII-PIGAIVFV 873

  Fly   504 NIALFVSTTHQLTCGLWKRDDVKSSSEKSALGRVCLKLVV----VMGVTWIADILSWLVGG---- 560
            |  ||......:........:.|:..||. :.:..:|.:|    |:|::|   :|.:.|.|    
Zfish   874 N--LFTLAVVIMKIATPSISEAKARDEKD-VAKSMIKTIVFLSPVLGLSW---VLGFFVLGLDLT 932

  Fly   561 --PHGV---WFFTDLINALQGVFIFIV--VGCQPQVWTACRRIFCPRLRHDITNTTNGVQHSSSS 618
              |...   :.|| :.|:|||:||.:.  || :.:|..|..:.|  :::..:.:.|.....:.||
Zfish   933 VKPWAALVNYSFT-IFNSLQGLFILLTNCVG-EKKVRDALLKRF--KIKQSVHSKTESSSKAQSS 993

  Fly   619  618
            Zfish   994  993

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 74/311 (24%)
TM helix 1 327..352 CDD:410632 7/26 (27%)
TM helix 2 362..384 CDD:410632 3/21 (14%)
TM helix 3 396..423 CDD:410632 10/30 (33%)
TM helix 4 441..461 CDD:410632 3/19 (16%)
TM helix 5 485..515 CDD:410632 10/32 (31%)
TM helix 6 530..557 CDD:410632 8/30 (27%)
TM helix 7 562..587 CDD:410632 10/29 (34%)
adgrf3aXP_021322955.3 None

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