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Protein Alignment SNRPG and LSM8
DIOPT Version :10
| Sequence 1: | NP_573139.1 |
Gene: | SNRPG / 32636 |
FlyBaseID: | FBgn0261791 |
Length: | 76 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_012556.2 |
Gene: | LSM8 / 853479 |
SGDID: | S000003783 |
Length: | 109 |
Species: | Saccharomyces cerevisiae |
| Alignment Length: | 72 |
Identity: | 17/72 - (23%) |
| Similarity: | 32/72 - (44%) |
Gaps: | 14/72 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 9 VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEE------CKDNTKNNIGMVVIRGNSI 67
:|.|::||:::....|..:...|.|||...|:.:.:.... ||.. ::||:.|
Yeast 5 LKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNRISKEFICKAQ--------LLRGSEI 61
Fly 68 VMVEALD 74
.:|..:|
Yeast 62 ALVGLID 68
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SNRPG | NP_573139.1 |
Sm_G |
5..74 |
CDD:212466 |
16/70 (23%) |
| LSM8 | NP_012556.2 |
LSm8 |
2..85 |
CDD:212474 |
17/72 (24%) |
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