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Protein Alignment SNRPG and LSM8
DIOPT Version :10
| Sequence 1: | NP_573139.1 |
Gene: | SNRPG / 32636 |
FlyBaseID: | FBgn0261791 |
Length: | 76 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001185323.1 |
Gene: | LSM8 / 842881 |
AraportID: | AT1G65700 |
Length: | 141 |
Species: | Arabidopsis thaliana |
| Alignment Length: | 109 |
Identity: | 20/109 - (18%) |
| Similarity: | 44/109 - (40%) |
Gaps: | 47/109 - (43%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 13 MDKRMMLKLNGGRAVTGILRGFDPFMNVVLDD--------------------------------- 44
:|:.:.:..|.||.:.|:|:|||...|::||:
plant 11 VDQIISVITNDGRNIVGVLKGFDQATNIILDESHERVFSTKCHLFNRILRKLTQIFKIGLVLQFF 75
Fly 45 ---------TVEECK----DNTKNNI-GMVVIRGNSIVMVEALD 74
::::|. :..:.:: |:.:|||::|.::..||
plant 76 VCMSGHVDTSLDKCSWIFLEGVQQHVLGLYIIRGDNIGVIGELD 119
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SNRPG | NP_573139.1 |
Sm_G |
5..74 |
CDD:212466 |
18/107 (17%) |
| LSM8 | NP_001185323.1 |
LSm8 |
7..137 |
CDD:212474 |
20/109 (18%) |
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