DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNRPG and lsm6

DIOPT Version :10

Sequence 1:NP_573139.1 Gene:SNRPG / 32636 FlyBaseID:FBgn0261791 Length:76 Species:Drosophila melanogaster
Sequence 2:NP_001165068.1 Gene:lsm6 / 779701 XenbaseID:XB-GENE-1007008 Length:80 Species:Xenopus tropicalis


Alignment Length:76 Identity:23/76 - (30%)
Similarity:40/76 - (52%) Gaps:1/76 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKAHPPE-VKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIRG 64
            :.|..|.: :|:.:.:.:::|||.|....|:|...|.:||:.|:.|.|......||..|...|||
 Frog     3 LRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRG 67

  Fly    65 NSIVMVEALDR 75
            |:::.:....|
 Frog    68 NNVLYISTQKR 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNRPGNP_573139.1 Sm_G 5..74 CDD:212466 21/69 (30%)
lsm6NP_001165068.1 LSm6 7..74 CDD:212473 21/66 (32%)

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