DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNRPG and SNRPF

DIOPT Version :10

Sequence 1:NP_573139.1 Gene:SNRPG / 32636 FlyBaseID:FBgn0261791 Length:76 Species:Drosophila melanogaster
Sequence 2:NP_003086.1 Gene:SNRPF / 6636 HGNCID:11162 Length:86 Species:Homo sapiens


Alignment Length:73 Identity:20/73 - (27%)
Similarity:37/73 - (50%) Gaps:4/73 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PPEVKKYMD----KRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVVIRGNS 66
            |...|.:::    |.:|:||..|....|.|...|.:||:.|.:|.|........::|.|:||.|:
Human     4 PLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRCNN 68

  Fly    67 IVMVEALD 74
            ::.:..::
Human    69 VLYIRGVE 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNRPGNP_573139.1 Sm_G 5..74 CDD:212466 20/71 (28%)
SNRPFNP_003086.1 Sm_F 6..74 CDD:212469 19/67 (28%)

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