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Protein Alignment SNRPG and lsm8
DIOPT Version :10
| Sequence 1: | NP_573139.1 |
Gene: | SNRPG / 32636 |
FlyBaseID: | FBgn0261791 |
Length: | 76 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001289395.1 |
Gene: | lsm8 / 566017 |
ZFINID: | ZDB-GENE-070629-3 |
Length: | 96 |
Species: | Danio rerio |
| Alignment Length: | 78 |
Identity: | 19/78 - (24%) |
| Similarity: | 46/78 - (58%) |
Gaps: | 8/78 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MSKAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKN----NIGMVV 61
||.| ::.|:.:.:.:..:.||.:.|.|:|||..:|::||::.|....:::. .:|:.:
Zfish 1 MSTA----LESYIHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYI 61
Fly 62 IRGNSIVMVEALD 74
:||:::.::..:|
Zfish 62 VRGDNVAVIGEID 74
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SNRPG | NP_573139.1 |
Sm_G |
5..74 |
CDD:212466 |
15/72 (21%) |
| lsm8 | NP_001289395.1 |
LSm8 |
2..92 |
CDD:212474 |
18/77 (23%) |
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